Package: kalign (1:3.4.0-1 and others)

Links for kalign

Debian Resources:

Download Source Package kalign:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [msa.sbc.su.se]

Similar packages:

allineamenti multipli di sequenza globali e progressivi

Kalign è uno strumento a riga di comando per fare allineamenti multipli di sequenze biologiche. Usa l'algoritmo per corrispondenze di stringhe Muth-Manber per migliorare sia l'accuratezza che la velocità dell'allineamento. Usa un approccio globale, progressivo per l'allineamento, arricchito dall'uso di un algoritmo per corrispondenze approssimate di stringhe per calcolare le distanze tra le sequenze e incorporando corrispondenze locali nell'allineamento globale.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to kalign

depends

recommends

suggests

enhances

dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

Libreria C GNU: librerie condivise
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.39) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

Libreria C GNU: librerie condivise
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libgomp1 (>= 4.9)

libreria di supporto GOMP (GCC OpenMP)

enh: bioperl-run

wrapper BioPerl: script
enh: t-coffee

allineamento di sequenze multiple

Download kalign

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	1:3.4.0-1+b1	85.7 kB	409.0 kB	[list of files]
amd64	1:3.4.0-1+b1	134.3 kB	1,127.0 kB	[list of files]
arm64	1:3.4.0-1+b1	86.8 kB	407.0 kB	[list of files]
armel	1:3.4.0-1+b1	79.9 kB	305.0 kB	[list of files]
armhf	1:3.4.0-1+b1	77.4 kB	245.0 kB	[list of files]
hppa (unofficial port)	1:3.4.0-1+b1	83.3 kB	324.0 kB	[list of files]
i386	1:3.4.0-1+b1	88.8 kB	341.0 kB	[list of files]
ia64 (unofficial port)	1:3.4.0-1	105.1 kB	557.0 kB	[list of files]
m68k (unofficial port)	1:3.4.0-1+b1	80.5 kB	293.0 kB	[list of files]
mips64el	1:3.4.0-1+b1	84.1 kB	421.0 kB	[list of files]
ppc64 (unofficial port)	1:3.4.0-1+b1	92.4 kB	471.0 kB	[list of files]
ppc64el	1:3.4.0-1+b1	99.9 kB	471.0 kB	[list of files]
riscv64	1:3.4.0-1+b1	88.3 kB	287.0 kB	[list of files]
s390x	1:3.4.0-1+b1	96.4 kB	371.0 kB	[list of files]
sh4 (unofficial port)	1:3.4.0-1+b1	88.8 kB	278.0 kB	[list of files]
sparc64 (unofficial port)	1:3.4.0-1+b1	75.0 kB	2,138.0 kB	[list of files]
x32 (unofficial port)	1:3.4.0-1+b1	90.2 kB	329.0 kB	[list of files]