Paket: nanopolish (0.14.0-1)

nanopolish için bağlantılar

Debian Kaynakları:

nanopolish Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

consensus caller for nanopore sequencing data

Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.

nanopolish ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libgcc-s1 (>= 3.3.1) [amd64, arm64, i386, mips64el]

GCC support library

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [mipsel]
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libhdf5-103-1

HDF5 C runtime files - serial version
dep: libhts3 (>= 1.10)

C library for high-throughput sequencing data formats
dep: libslow5-0 (>= 0.5.1+dfsg)

library for reading & writing SLOW5 files
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: libstreamvbyte0 (>= 0.4.1)

fast integer compression in C using the StreamVByte codec
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.1.4)

compression library - runtime

rec: python3-biopython

Python3 library for bioinformatics
rec: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

sug: make

utility for directing compilation
sug: perl

Larry Wall's Practical Extraction and Report Language

nanopolish indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	2.150,9 kB	9.355,0 kB	[dosya listesi]
arm64	2.084,4 kB	9.218,0 kB	[dosya listesi]
armel	2.082,3 kB	9.345,0 kB	[dosya listesi]
armhf	2.096,9 kB	8.961,0 kB	[dosya listesi]
i386	2.167,9 kB	9.441,0 kB	[dosya listesi]
mips64el	2.110,5 kB	9.655,0 kB	[dosya listesi]
mipsel	2.128,5 kB	9.647,0 kB	[dosya listesi]
ppc64el	2.159,1 kB	9.667,0 kB	[dosya listesi]