Paket: nanopolish (0.14.0-1 ve diğerleri)

nanopolish için bağlantılar

Debian Kaynakları:

nanopolish Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

consensus caller for nanopore sequencing data

Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.

nanopolish ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.23) [sparc64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.29) [ppc64]

dep: libc6 (>= 2.38) [alpha, ia64, ppc64, sh4, sparc64 değil]

dep: libc6 (>= 2.40) [sh4]
dep: libc6.1 (>= 2.37) [ia64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.38) [alpha]
dep: libgcc-s1 (>= 3.3.1) [alpha, amd64, arm64, i386, mips64el, ppc64el, riscv64, x32]

GCC support library

dep: libgcc-s1 (>= 3.4.4) [ppc64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [ia64, sh4]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC support library
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC support library
dep: libgcc1 (>= 1:3.4) [sparc64]

Paket mevcut değil
dep: libgomp1 (>= 4.9) [sparc64]

GCC OpenMP (GOMP) support library

dep: libgomp1 (>= 6) [sparc64 değil]
dep: libhdf5-100 [sparc64]

Paket mevcut değil
dep: libhdf5-103-1 [ppc64]

HDF5 C runtime files - serial version
dep: libhdf5-103-1t64 [ia64]

HDF5 C runtime files - serial version
dep: libhdf5-310 (>= 1.14.3) [ia64, ppc64, sparc64 değil]

HDF5 C runtime files - serial version
dep: libhts2 [sparc64]

Paket mevcut değil
dep: libhts3 (>= 1.10) [ppc64]

C library for high-throughput sequencing data formats
dep: libhts3t64 (>= 1.17) [ppc64, sparc64 değil]

C library for high-throughput sequencing data formats
dep: libslow5-0 (>= 0.5.1+dfsg) [hppa]

library for reading & writing SLOW5 files
dep: libslow5-0t64 (>= 0.5.1) [hppa, ppc64, sparc64 değil]

library for reading & writing SLOW5 files
dep: libstdc++6 (>= 13.1) [ia64, m68k]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 14) [ia64, m68k, ppc64, sparc64 değil]

dep: libstdc++6 (>= 5.2) [sparc64]

dep: libstdc++6 (>= 9) [ppc64]
dep: libstreamvbyte0 (>= 0.4.1) [ppc64, sparc64 değil]

fast integer compression in C using the StreamVByte codec
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: perl [sparc64 değil]

Larry Wall's Practical Extraction and Report Language
dep: python3 [sparc64 değil]

interactive high-level object-oriented language (default python3 version)
dep: zlib1g (>= 1:1.1.4) [armel, armhf, hppa, m68k, sh4 değil]

compression library - runtime

dep: zlib1g (>= 1:1.2.3.3) [armel, armhf, hppa, m68k, sh4]

rec: python3-biopython

Python3 library for bioinformatics
rec: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

sug: make

utility for directing compilation
sug: perl

Larry Wall's Practical Extraction and Report Language
sug: python [sparc64]

Paket mevcut değil

nanopolish indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	0.14.0-1+b2	2.138,2 kB	9.862,0 kB	[dosya listesi]
amd64	0.14.0-1+b3	2.149,9 kB	9.639,0 kB	[dosya listesi]
arm64	0.14.0-1+b3	2.079,4 kB	9.475,0 kB	[dosya listesi]
armel	0.14.0-1+b2	2.085,0 kB	9.533,0 kB	[dosya listesi]
armhf	0.14.0-1+b2	2.090,4 kB	9.129,0 kB	[dosya listesi]
hppa (resmi olmayan port)	0.14.0-1+b2	2.140,7 kB	9.757,0 kB	[dosya listesi]
i386	0.14.0-1+b2	2.171,1 kB	9.713,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	0.14.0-1+b1	2.281,9 kB	10.820,0 kB	[dosya listesi]
m68k (resmi olmayan port)	0.14.0-1+b2	2.118,0 kB	9.409,0 kB	[dosya listesi]
mips64el	0.14.0-1+b2	2.106,0 kB	9.846,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	0.13.3-2	2.208,6 kB	9.987,0 kB	[dosya listesi]
ppc64el	0.14.0-1+b2	2.150,9 kB	9.859,0 kB	[dosya listesi]
riscv64	0.14.0-1+b3	2.144,4 kB	9.315,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	0.14.0-1+b2	2.260,5 kB	9.603,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	0.5.0-1+b1	1.799,8 kB	3.490,0 kB	[dosya listesi]
x32 (resmi olmayan port)	0.14.0-1+b3	2.151,4 kB	9.553,0 kB	[dosya listesi]