软件包：nanopolish（0.14.0-1）

nanopolish 的相关链接

Debian 的资源：

下载源码包 nanopolish：

维护小组：

外部的资源：

主页 [github.com]

相似软件包：

consensus caller for nanopore sequencing data

Nanopolish uses a signal-level hidden Markov model for consensus calling of nanopore genome sequencing data. It can perform signal-level analysis of Oxford Nanopore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference genome and more.

其他与 nanopolish 有关的软件包

依赖

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建议

增强

dep: libc6 (>= 2.29)

GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
dep: libgcc-s1 (>= 3.3.1) [amd64, arm64, i386, mips64el]

GCC 支持库

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [mipsel]
dep: libgomp1 (>= 6)

GCC OpenMP（GOMP）支持库
dep: libhdf5-103-1

HDF5 C runtime files - serial version
dep: libhts3 (>= 1.10)

C library for high-throughput sequencing data formats
dep: libslow5-0 (>= 0.5.1+dfsg)

library for reading & writing SLOW5 files
dep: libstdc++6 (>= 11)

GNU 标准 C++ 库，第3版
dep: libstreamvbyte0 (>= 0.4.1)

fast integer compression in C using the StreamVByte codec
dep: perl

拉里沃尔的实用报表提取语言(Perl)
dep: python3

交互式高级面向对象语言（默认 python3 版本）
dep: zlib1g (>= 1:1.1.4)

压缩库 - 运行时

rec: python3-biopython

Python3 library for bioinformatics
rec: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

sug: make

utility for directing compilation
sug: perl

拉里沃尔的实用报表提取语言(Perl)

下载 nanopolish

下载可用于所有硬件架构的
硬件架构	软件包大小	安装后大小	文件
amd64	2,150.9 kB	9,355.0 kB	[文件列表]
arm64	2,084.4 kB	9,218.0 kB	[文件列表]
armel	2,082.3 kB	9,345.0 kB	[文件列表]
armhf	2,096.9 kB	8,961.0 kB	[文件列表]
i386	2,167.9 kB	9,441.0 kB	[文件列表]
mips64el	2,110.5 kB	9,655.0 kB	[文件列表]
mipsel	2,128.5 kB	9,647.0 kB	[文件列表]
ppc64el	2,159.1 kB	9,667.0 kB	[文件列表]