Paket: tiddit (3.5.2+dfsg-1)

tiddit için bağlantılar

Debian Kaynakları:

tiddit Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

structural variant calling

TIDDIT is a tool to used to identify chromosomal rearrangements using Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter- chromosomal translocations, deletions, tandem-duplications and inversions, using supplementary alignments as well as discordant pairs.

TIDDIT has two analysis modules. The sv mode, which is used to search for structural variants. And the cov mode that analyse the read depth of a bam file and generates a coverage report.

tiddit ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.17) [arm64, ppc64el]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.4) [arm64, ppc64el değil]
dep: python3

interactive high-level object-oriented language (default python3 version)

dep: python3 (<< 3.12)

dep: python3 (>= 3.11~)
dep: python3-joblib

tools to provide lightweight pipelining in Python
dep: python3-numpy

Fast array facility to the Python 3 language
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

tiddit indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	265,3 kB	1.151,0 kB	[dosya listesi]
arm64	213,8 kB	1.187,0 kB	[dosya listesi]
armel	222,8 kB	965,0 kB	[dosya listesi]
armhf	225,4 kB	677,0 kB	[dosya listesi]
i386	246,9 kB	1.069,0 kB	[dosya listesi]
mips64el	199,6 kB	1.332,0 kB	[dosya listesi]
mipsel	201,2 kB	1.242,0 kB	[dosya listesi]
ppc64el	228,7 kB	1.315,0 kB	[dosya listesi]