软件包：python-cogent（1.9-14 以及其他的） [debports]
framework for genomic biology
PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for:
* controlling third-party applications, * devising workflows; querying databases, * conducting novel probabilistic analyses of biological sequence evolution, and * generating publication quality graphics.It is distinguished by many unique built-in capabilities (such as true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data.
负责填实 python-cogent 的软件包
- python3-cogent3
- framework for genomic biology
其他与 python-cogent 有关的软件包
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- dep: libc6 (>= 2.28) [sh4]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.3.4) [hppa]
- dep: libc6 (>= 2.4) [sparc64]
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- dep: python
- 软件包暂时不可用
- dep: python (<< 2.8)
- dep: python (>= 2.7~)
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- dep: python-matplotlib
- 软件包暂时不可用
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- dep: python-numpy (>= 1:1.13.1) [hppa]
- 软件包暂时不可用
- dep: python-numpy (>= 1:1.14.3) [除 hppa]
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- dep: python-numpy-abi9
- 软件包暂时不可用
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- rec: blast2
- 软件包暂时不可用
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- rec: cd-hit
- suite of programs designed to quickly group sequences
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- rec: clearcut
- extremely efficient phylogenetic tree reconstruction
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- rec: dialign
- 分段多重序列比对
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- rec: muscle
- Multiple alignment program of protein sequences
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- sug: cdbfasta
- Constant DataBase indexing and retrieval tools for multi-FASTA files
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- sug: clustalw
- global multiple nucleotide or peptide sequence alignment
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- sug: fasttree
- phylogenetic trees from alignments of nucleotide or protein sequences
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- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- sug: mothur
- sequence analysis suite for research on microbiota
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- sug: parsinsert
- Parsimonious Insertion of unclassified sequences into phylogenetic trees
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- sug: python-cogent-doc
- docs for python3-cogent3
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- sug: rdp-classifier
- extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
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- sug: rtax
- Classification of sequence reads of 16S ribosomal RNA gene