Paket: libtfbs-perl (0.7.1+ds-3 ve diğerleri)

libtfbs-perl için bağlantılar

Debian Kaynakları:

libtfbs-perl Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [tfbs.genereg.net]

Benzer paketler:

scanning DNA sequence with a position weight matrix

The TFBS perl modules comprise a set of routines to interact with the Transfac and Jaspar databases that describe a special family of proteins, the transcription factors. These bind to genomic DNA to initiate (or prevent) the readout of a gene. Once multiple binding sites are known for a transcription factor, these are gathered in a single file and are aligned in order to find position-specific characteristica that might be used to predict such binding events in novel DNA sequences.

If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002) TFBS: Computational framework for transcription factor binding site analysis. Bioinformatics 18:1135-1136".

Note: the TFBS perl module is no longer under active development. All the functionality can be found in the TFBSTools Bioconductor package; users are highly encouraged to switch. <http://bioconductor.org/packages/TFBSTools/>

Etiketler: Yazılım Geliştirme: Perl Geliştirme, Kitaplıklar, Alan: field::biology, field::biology:bioinformatics, Geliştirildiği dil: C, implemented-in::perl, interface::commandline, Rol: Geliştirme Kitaplığı, Program

libtfbs-perl ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: bioperl

Perl tools for computational molecular biology
dep: libc6 (>= 2.14) [amd64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.16) [x32]

dep: libc6 (>= 2.17) [arm64]

dep: libc6 (>= 2.22) [ppc64, ppc64el]

dep: libc6 (>= 2.27) [riscv64]

dep: libc6 (>= 2.37) [sh4]

dep: libc6 (>= 2.7) [armel, armhf, hppa, i386, m68k, mips64el, s390x, sparc64]
dep: libc6.1 (>= 2.37) [ia64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.7) [alpha]
dep: libdbi-perl

Perl Database Interface (DBI)
dep: libwww-perl

simple and consistent interface to the world-wide web
dep: pdl (>= 1:2.054-1) [alpha]

perl data language: Perl extensions for numerics

dep: pdl (>= 1:2.085-1) [ia64]

dep: pdl (>= 1:2.085-1+b1) [alpha, hppa, ia64, m68k, sh4 değil]

dep: pdl (>= 1:2.087-1) [m68k, sh4]

dep: pdl (>= 1:2.088-2) [hppa]
dep: pdlapi-15 [alpha]

sanal paketi sağlayan pdl
dep: pdlapi-20 [alpha değil]

sanal paketi sağlayan pdl
dep: perl [alpha]

Larry Wall's Practical Extraction and Report Language

dep: perl (>= 5.38.2-3.2) [alpha, armhf, hppa, m68k, sh4 değil]

dep: perl (>= 5.38.2-3.2+b1) [armhf, hppa, m68k, sh4]
dep: perlapi-5.32.1 [alpha]

Paket mevcut değil
dep: perlapi-5.38.2 [alpha, armel, armhf, hppa, m68k, sh4, x32 değil]

sanal paketi sağlayan perl-base
dep: perlapi-5.38.2t64 [armel, armhf, hppa, m68k, sh4, x32]

sanal paketi sağlayan perl-base

rec: libgd-gd2-perl

sanal paketi sağlayan libgd-perl

ya da libgd-gd2-noxpm-perl

sanal paketi sağlayan libgd-perl

libtfbs-perl indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	0.7.1+ds-1	229,0 kB	992,0 kB	[dosya listesi]
amd64	0.7.1+ds-3	216,5 kB	979,0 kB	[dosya listesi]
arm64	0.7.1+ds-3	216,8 kB	1.027,0 kB	[dosya listesi]
armel	0.7.1+ds-3	217,6 kB	979,0 kB	[dosya listesi]
armhf	0.7.1+ds-3	215,8 kB	975,0 kB	[dosya listesi]
hppa (resmi olmayan port)	0.7.1+ds-3	217,1 kB	980,0 kB	[dosya listesi]
i386	0.7.1+ds-3	217,1 kB	979,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	0.7.1+ds-3	218,4 kB	985,0 kB	[dosya listesi]
m68k (resmi olmayan port)	0.7.1+ds-3	215,8 kB	979,0 kB	[dosya listesi]
mips64el	0.7.1+ds-3	216,6 kB	1.028,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	0.7.1+ds-3	217,8 kB	1.027,0 kB	[dosya listesi]
ppc64el	0.7.1+ds-3	217,4 kB	1.027,0 kB	[dosya listesi]
riscv64	0.7.1+ds-3	217,0 kB	975,0 kB	[dosya listesi]
s390x	0.7.1+ds-3	216,8 kB	979,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	0.7.1+ds-3	216,8 kB	1.027,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	0.7.1+ds-3	216,6 kB	1.989,0 kB	[dosya listesi]
x32 (resmi olmayan port)	0.7.1+ds-3	216,4 kB	979,0 kB	[dosya listesi]