Paket: fastahack (1.0.0+dfsg-7)

fastahack için bağlantılar

Debian Kaynakları:

libfastahack Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

utility for indexing and sequence extraction from FASTA files

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

fastahack ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.14) [amd64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.17) [arm64, ppc64el]

dep: libc6 (>= 2.4) [amd64, arm64, ppc64el değil]
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f) [amd64, arm64, mips64el, ppc64el]

library for indexing and sequence extraction from FASTA files (lib)

dep: libfastahack0 (>= 1.0.0+dfsg) [amd64, arm64, mips64el, ppc64el değil]
dep: libgcc-s1 (>= 3.0) [armel, armhf değil]

GCC support library

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3

fastahack indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	12,1 kB	40,0 kB	[dosya listesi]
arm64	11,5 kB	40,0 kB	[dosya listesi]
armel	11,5 kB	35,0 kB	[dosya listesi]
armhf	11,5 kB	35,0 kB	[dosya listesi]
i386	12,5 kB	43,0 kB	[dosya listesi]
mips64el	11,8 kB	41,0 kB	[dosya listesi]
mipsel	11,8 kB	40,0 kB	[dosya listesi]
ppc64el	12,1 kB	84,0 kB	[dosya listesi]
s390x	11,7 kB	40,0 kB	[dosya listesi]