Paket: libvcflib-tools (1.0.3+dfsg-2)

libvcflib-tools için bağlantılar

Debian Kaynakları:

libvcflib Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

libvcflib-tools ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f) [amd64, arm64, mips64el, ppc64el]

library for indexing and sequence extraction from FASTA files (lib)

dep: libfastahack0 (>= 1.0.0+dfsg) [amd64, arm64, mips64el, ppc64el değil]
dep: libgcc-s1 (>= 3.0) [armel, armhf, ppc64el değil]

GCC support library

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: libtabixpp0 (>= 1.0.0)

C++ wrapper to tabix indexer
dep: libvcflib1 (>= 1.0.3+dfsg)

C++ library for parsing and manipulating VCF files
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: r-base-core

GNU R core of statistical computation and graphics system
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-gridbase

GNU R Integration of base and grid graphics
dep: r-cran-plyr

tools for splitting, applying and combining data

sug: r-cran-pracma

practical numerical math functions for GNU R

libvcflib-tools indir

Tüm mevcut mimariler için indir
Mimari	Paket Boyutu	Kurulu Boyut	Dosyalar
amd64	730,3 kB	4.880,0 kB	[dosya listesi]
arm64	651,0 kB	6.692,0 kB	[dosya listesi]
armel	623,8 kB	6.603,0 kB	[dosya listesi]
armhf	641,6 kB	6.219,0 kB	[dosya listesi]
i386	759,9 kB	4.915,0 kB	[dosya listesi]
mips64el	645,8 kB	7.617,0 kB	[dosya listesi]
mipsel	650,6 kB	7.253,0 kB	[dosya listesi]
ppc64el	712,4 kB	7.716,0 kB	[dosya listesi]
s390x	652,4 kB	4.620,0 kB	[dosya listesi]