[ Källkod: biobambam2 ]
Paket: biobambam2 (2.0.185+ds-2)
Länkar för biobambam2
Debianresurser:
Hämta källkodspaketet biobambam2:
- [biobambam2_2.0.185+ds-2.dsc]
- [biobambam2_2.0.185+ds.orig.tar.xz]
- [biobambam2_2.0.185+ds-2.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [gitlab.com]
Liknande paket:
tools for early stage alignment file processing
This package contains some tools for processing BAM files, including
bamsormadup: parallel sorting and duplicate marking
bamcollate2: reads BAM and writes BAM reordered such that alignment
or collated by query name
bammarkduplicates: reads BAM and writes BAM with duplicate alignments
marked using the BAM flags field
bammaskflags: reads BAM and writes BAM while masking (removing) bits
from the flags column
bamrecompress: reads BAM and writes BAM with a defined compression
setting. This tool is capable of multi-threading.
bamsort: reads BAM and writes BAM resorted by coordinates or
query name
bamtofastq: reads BAM and writes FastQ; output can be collated
or uncollated by query name
Andra paket besläktade med biobambam2
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-
- dep: libc6 (>= 2.34) [ej alpha, ia64]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libgcc-s1 (>= 3.0) [arm64, ppc64el]
- GCC stödbibliotek
- dep: libgcc-s1 (>= 3.4) [ej arm64, i386, ia64, ppc64el]
- dep: libgcc-s1 (>= 4.2) [ia64]
- dep: libgcc-s1 (>= 7) [i386]
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libmaus2-2 (>= 2.0.813+ds)
- collection of data structures and algorithms for biobambam
-
- dep: libstdc++6 (>= 13.1)
- GNU standardbibliotek v3 för C++
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: zlib1g (>= 1:1.1.4)
- Kompressionsbibliotek - körtidspaket
Hämta biobambam2
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| alpha (inofficiell anpassning) | 9.150,3 kbyte | 73.920,0 kbyte | [filförteckning] |
| amd64 | 9.203,8 kbyte | 64.327,0 kbyte | [filförteckning] |
| arm64 | 8.563,8 kbyte | 64.163,0 kbyte | [filförteckning] |
| i386 | 9.933,6 kbyte | 71.707,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 10.230,3 kbyte | 117.346,0 kbyte | [filförteckning] |
| mips64el | 7.602,0 kbyte | 75.740,0 kbyte | [filförteckning] |
| ppc64el | 8.944,3 kbyte | 76.579,0 kbyte | [filförteckning] |
| riscv64 | 8.815,6 kbyte | 51.675,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 9.225,9 kbyte | 60.999,0 kbyte | [filförteckning] |