[ Zdroj: ugene ]
Balík: ugene (34.0+dfsg-2) [non-free]
Odkazy pre ugene
Zdroje Debian:
Stiahnuť zdrojový balík ugene:
Správcovia:
- Debian Med Packaging Team (Stránka QA, Konferencia)
- Steffen Moeller (Stránka QA)
- Andreas Tille (Stránka QA)
- Olivier Sallou (Stránka QA)
Externé zdroje:
- Domovská stránka [ugene.unipro.ru]
Podobné balíky:
integrated bioinformatics toolkit
Unipro UGENE is a cross-platform visual environment for DNA and protein sequence analysis. UGENE integrates the most important bioinformatics computational algorithms and provides an easy-to-use GUI for performing complex analysis of the genomic data. One of the main features of UGENE is a designer for custom bioinformatics workflows.
Ostatné balíky súvisiace s balíkom ugene
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- dep: libc6 (>= 2.30)
- knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- podporná knižnica GCC
-
- dep: libgl1
- knižnica dispečera GL nezávislá od dodávateľa - podpora spätnej kompatibility s GL
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- dep: libglu1-mesa
- OpenGL knižnica Mesa - GLU
- alebo libglu1
- virtuálny balík poskytovaný balíkom libglu1-mesa
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- dep: libqt5core5a (>= 5.15.1)
- základný modul Qt 5
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- dep: libqt5gui5 (>= 5.14.1)
- modul grafického používateľského rozhrania Qt 5
- alebo libqt5gui5-gles (>= 5.14.1)
- Qt 5 GUI module — OpenGL ES variant
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- dep: libqt5network5 (>= 5.0.2)
- modul siete Qt 5
-
- dep: libqt5opengl5 (>= 5.0.2)
- Qt 5 - modul OpenGL
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- dep: libqt5printsupport5 (>= 5.0.2)
- Qt 5 - modul na podporu tlačenia
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- dep: libqt5script5 (>= 5.6.0~beta)
- Qt 5 - skriptovací modul
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- dep: libqt5scripttools5 (>= 5.6.0~beta)
- Qt 5 script tools module
-
- dep: libqt5sql5 (>= 5.0.2)
- Qt 5 - modul SQL
-
- dep: libqt5svg5 (>= 5.6.0~beta)
- Qt 5 - modul SVG
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- dep: libqt5test5 (>= 5.6.0~beta)
- testovací modul Qt 5
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- dep: libqt5webchannel5 (>= 5.6.1)
- knižnica na webovú komunikáciu pre Qt
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- dep: libqt5webenginewidgets5 (>= 5.14.1)
- knižnica jadra webového obsahu pre Qt - Widget
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- dep: libqt5websockets5 (>= 5.6.0)
- Qt 5 Web Sockets module
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- dep: libqt5widgets5 (>= 5.15.1)
- modul ovládacích prvkov Qt 5
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- dep: libqt5xml5 (>= 5.1.0)
- Qt 5 - XML modul
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- dep: libsqlite3-0 (>= 3.7.11)
- zdieľaná knižnica SQLite 3
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- dep: libstdc++6 (>= 9)
- štandardná knižnica C++ GNU v3
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- dep: ugene-data
- required data for UGENE - integrated bioinformatics toolkit
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- dep: zlib1g (>= 1:1.2.3.3)
- komprimačná knižnica - dynamická verzia
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- rec: bedtools
- suite of utilities for comparing genomic features
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- rec: bowtie
- Ultrafast memory-efficient short read aligner
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- rec: bowtie2
- ultrafast memory-efficient short read aligner
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- rec: bwa
- Burrows-Wheeler Aligner
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- rec: clustalo
- General-purpose multiple sequence alignment program for proteins
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- rec: clustalw
- globálne viacnásobné zarovnávanie sekvencií nukleotidov alebo peptidov
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- rec: cutadapt
- Clean biological sequences from high-throughput sequencing reads
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- rec: default-jre-headless
- štandardné dynamické prostredie Java alebo kompatibilné s Javou (bez displeja)
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- rec: fastqc
- quality control for high throughput sequence data
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- rec: hisat2
- graph-based alignment of short nucleotide reads to many genomes
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- rec: hmmer
- profile hidden Markov models for protein sequence analysis
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- rec: hmmer2
- profile hidden Markov models for protein sequence analysis
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- rec: kalign
- Global and progressive multiple sequence alignment
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- rec: kraken
- assigning taxonomic labels to short DNA sequences
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- rec: macs
- Model-based Analysis of ChIP-Seq on short reads sequencers
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- rec: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: mrbayes
- Bayesian Inference of Phylogeny
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- rec: muscle
- Multiple alignment program of protein sequences
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- rec: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- rec: phyml
- Phylogenetic estimation using Maximum Likelihood
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- rec: primer3
- tool to design flanking oligo nucleotides for DNA amplification
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- rec: r-base
- GNU R statistical computation and graphics system
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- rec: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: spades
- genome assembler for single-cell and isolates data sets
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- rec: t-coffee
- Multiple Sequence Alignment
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- rec: trimmomatic
- flexible read trimming tool for Illumina NGS data
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- rec: vcftools
- Collection of tools to work with VCF files
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- sug: cufflinks
- Transcript assembly, differential expression and regulation for RNA-Seq
Stiahnuť ugene
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 16,464.7 kB | 59,996.0 kB | [zoznam súborov] |