Package: gmap (2024-05-20+ds-1)

Links for gmap

Debian Resources:

Download Source Package gmap:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Shaun Jackman (QA Page)
Andreas Tille (QA Page)
Alexandre Mestiashvili (QA Page)
Étienne Mollier (QA Page)

External Resources:

Homepage [research-pub.gene.com]

Similar packages:

allineamento tollerante agli SNP e con splicing per mRNA e letture corte

Questo pacchetto contiene i programmi GMAP e GSNAP, oltre ad utilità per gestire database di genomi in formato GMAP/GSNAP. GMAP (Genomic Mapping and Alignment Program) è uno strumento per allineare sequenze di EST, mRNA e cDNA. GSNAP (Genomic Short-read Nucleotide Alignment Program) è uno strumento per allineare letture di trascrittoma a terminali singoli e appaiati. Entrambi gli strumenti possono usare un database di:

 * siti di splicing noti e identificare nuovi siti di splice;
 * polimorfismi a singolo nucleotide (SNP) noti.

GSNAP può allineare DNA trattato con bisolfito.

Tags: Field: Biology, field::biology:bioinformatics, field::biology:structural, Role: Program, Purpose: Analysing

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Download gmap

Download for all available architectures
Architecture	Package Size	Installed Size	Files
alpha (unofficial port)	5,568.7 kB	42,575.0 kB	[list of files]
amd64	32,246.6 kB	253,490.0 kB	[list of files]
arm64	6,244.2 kB	58,942.0 kB	[list of files]
armel	4,824.3 kB	44,107.0 kB	[list of files]
armhf	5,383.8 kB	41,971.0 kB	[list of files]
i386	5,559.4 kB	44,303.0 kB	[list of files]
mips64el	5,035.7 kB	55,487.0 kB	[list of files]
ppc64el	6,436.0 kB	61,438.0 kB	[list of files]
riscv64	6,215.8 kB	57,262.0 kB	[list of files]
sh4 (unofficial port)	5,648.4 kB	46,446.0 kB	[list of files]
x32 (unofficial port)	5,422.1 kB	45,815.0 kB	[list of files]