Paketti: ampliconnoise (1.29-10 ja muut)
Links for ampliconnoise
Debian-palvelut:
Imuroi lähdekoodipaketti ampliconnoise:
Ylläpitäjät:
- Debian Med Packaging Team (Laadunvalvontasivu, Mail Archive)
- Tim Booth (Laadunvalvontasivu)
- Andreas Tille (Laadunvalvontasivu)
- Pranav Ballaney (Laadunvalvontasivu)
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Muut pakettiin ampliconnoise liittyvät paketit
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- dep: libc6 (>= 2.34)
- GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
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- dep: libopenmpi3 (>= 4.1.4)
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: openmpi-bin
- high performance message passing library -- binaries
Imuroi ampliconnoise
Arkkitehtuuri | Versio | Paketin koko | Koko asennettuna | Tiedostot |
---|---|---|---|---|
amd64 | 1.29-10+b2 | 1,085.5 kt | 2,041.0 kt | [tiedostoluettelo] |
arm64 | 1.29-10+b2 | 1,074.0 kt | 2,401.0 kt | [tiedostoluettelo] |
armel | 1.29-10+b2 | 1,068.5 kt | 2,388.0 kt | [tiedostoluettelo] |
armhf | 1.29-10+b2 | 1,062.3 kt | 2,388.0 kt | [tiedostoluettelo] |
i386 | 1.29-10+b2 | 1,079.4 kt | 2,000.0 kt | [tiedostoluettelo] |
mips64el | 1.29-10+b2 | 1,075.7 kt | 2,423.0 kt | [tiedostoluettelo] |
mipsel | 1.29-10+b2 | 1,075.4 kt | 2,410.0 kt | [tiedostoluettelo] |
ppc64el | 1.29-10+b2 | 1,097.9 kt | 3,105.0 kt | [tiedostoluettelo] |
s390x | 1.29-10+b2 | 1,076.4 kt | 2,005.0 kt | [tiedostoluettelo] |