[ Source: ampliconnoise ]
Paketti: ampliconnoise (1.29-9)
Links for ampliconnoise
Debian-palvelut:
Imuroi lähdekoodipaketti ampliconnoise:
Ylläpitäjät:
- Debian Med Packaging Team (Laadunvalvontasivu, Mail Archive)
- Tim Booth (Laadunvalvontasivu)
- Andreas Tille (Laadunvalvontasivu)
- Pranav Ballaney (Laadunvalvontasivu)
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Muut pakettiin ampliconnoise liittyvät paketit
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- dep: libc6 (>= 2.29)
- GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgsl25 (>= 2.6)
- GNU Scientific Library (GSL) -- library package
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- dep: libopenmpi3 (>= 4.0.4)
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: openmpi-bin
- high performance message passing library -- binaries
Imuroi ampliconnoise
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| amd64 | 1,080.6 kt | 2,036.0 kt | [tiedostoluettelo] |
| arm64 | 1,073.3 kt | 1,960.0 kt | [tiedostoluettelo] |
| armel | 1,065.4 kt | 1,955.0 kt | [tiedostoluettelo] |
| armhf | 1,061.2 kt | 1,819.0 kt | [tiedostoluettelo] |
| i386 | 1,078.5 kt | 2,011.0 kt | [tiedostoluettelo] |
| mips64el | 1,073.7 kt | 2,022.0 kt | [tiedostoluettelo] |
| mipsel | 1,070.4 kt | 1,973.0 kt | [tiedostoluettelo] |
| ppc64el | 1,093.8 kt | 2,592.0 kt | [tiedostoluettelo] |
| s390x | 1,073.6 kt | 2,012.0 kt | [tiedostoluettelo] |