Package: libbwa-dev (0.7.17-7 and others)

Links for libbwa-dev

Debian Resources:

Download Source Package bwa:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Andreas Tille (QA Page)
Carlos Borroto (QA Page)
Ognyan Kulev (QA Page)
Michael R. Crusoe (QA Page)

External Resources:

Homepage [bio-bwa.sourceforge.net]

Similar packages:

Burrows-Wheeler Aligner - kildefiler

Burrows-Wheeler Aligner (BWA) er en programpakke, for oversættelse af lavafvigende sekvenser mod en stor referencearvemasse, såsom den menneskelige arvemasse. Den består af tre algoritmer: BWA-backtrack, BWA-SW og BWA-MEM. Den første algoritme er designet for Illunina-sekvenslæsninger op til 100 bp, mens de sidste to er for længere sekvenser fra 70 bp til 1 Mbp. BWA-MEM og BWA-SW deler funktioner såsom understøttelse af long-read og opdelingssammenligning, men BWA-MEM, som er den seneste, anbefales generelt for højkvalitets forespørgsler, da den er hurtigere og mere præcis. BWA-MEM har også bedre ydelse end BWA-backtrack for 70-100 bp Illumina-læsninger.

Denne pakke indeholder kildefilerne for brug i andre programmer.

Tags: Software Development: Libraries, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, Role: role::devel-lib, role::program, Source Code, Purpose: use::comparing, works-with::biological-sequence

Other Packages Related to libbwa-dev

depends

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sug: samtools

Forarbejdning af sekvensopstillinger i SAM-, BAM- og CRAM-formater

Download libbwa-dev

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	0.7.17-7+b5	162.7 kB	610.0 kB	[list of files]
amd64	0.7.17-7+b3	152.4 kB	470.0 kB	[list of files]
arm64	0.7.17-7+b3	143.7 kB	457.0 kB	[list of files]
armel	0.7.17-7+b3	143.7 kB	420.0 kB	[list of files]
armhf	0.7.17-7+b3	143.8 kB	353.0 kB	[list of files]
hppa (unofficial port)	0.7.17-7+b3	169.3 kB	482.0 kB	[list of files]
i386	0.7.17-7+b3	166.2 kB	474.0 kB	[list of files]
ia64 (unofficial port)	0.7.17-7+b4	204.9 kB	764.0 kB	[list of files]
m68k (unofficial port)	0.7.17-7+b3	147.7 kB	440.0 kB	[list of files]
mips64el	0.7.17-7+b3	157.1 kB	551.0 kB	[list of files]
ppc64 (unofficial port)	0.7.17-7+b3	162.5 kB	542.0 kB	[list of files]
ppc64el	0.7.17-7+b3	171.1 kB	556.0 kB	[list of files]
riscv64	0.7.17-7+b3	292.9 kB	2,194.0 kB	[list of files]
s390x	0.7.17-7+b3	161.3 kB	506.0 kB	[list of files]
sh4 (unofficial port)	0.7.17-7+b3	197.7 kB	429.0 kB	[list of files]
sparc64 (unofficial port)	0.7.17-7+b3	137.6 kB	468.0 kB	[list of files]
x32 (unofficial port)	0.7.17-7+b3	156.6 kB	440.0 kB	[list of files]