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[ Source: bwa  ]

Package: libbwa-dev (0.7.18-1 and others)

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Burrows-Wheeler Aligner source files

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

This package contains the source files for use in other programs.

Tags: Software Development: Függvény-könyvtárak, Field: Biology, field::biology:bioinformatics, implemented-in::c, User Interface: Command Line, Role: role::devel-lib, role::program, Source Code, Purpose: use::comparing, works-with::biological-sequence

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Download libbwa-dev

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 0.7.18-1 167.9 kB626.0 kB [list of files]
amd64 0.7.18-1 152.0 kB479.0 kB [list of files]
arm64 0.7.18-1 147.0 kB472.0 kB [list of files]
armel 0.7.18-1 147.3 kB435.0 kB [list of files]
armhf 0.7.18-1 147.3 kB365.0 kB [list of files]
hppa (unofficial port) 0.7.18-1 169.7 kB484.0 kB [list of files]
i386 0.7.18-1 168.4 kB482.0 kB [list of files]
ia64 (unofficial port) 0.7.17-7+b4 204.9 kB764.0 kB [list of files]
m68k (unofficial port) 0.7.18-1 149.0 kB446.0 kB [list of files]
mips64el 0.7.18-1 160.8 kB568.0 kB [list of files]
ppc64 (unofficial port) 0.7.18-1 165.0 kB554.0 kB [list of files]
ppc64el 0.7.18-1 173.8 kB567.0 kB [list of files]
riscv64 0.7.18-1 300.8 kB2,340.0 kB [list of files]
s390x 0.7.18-1 165.3 kB519.0 kB [list of files]
sh4 (unofficial port) 0.7.18-1 200.6 kB439.0 kB [list of files]
sparc64 (unofficial port) 0.7.18-1 140.9 kB482.0 kB [list of files]
x32 (unofficial port) 0.7.18-1 155.4 kB447.0 kB [list of files]