Package: dnaclust (3-7 and others)

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Homepage [dnaclust.sourceforge.net]

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Værktøj til klyngedannelse af korte DNA-sekvenser

Dnaclust er et værktøj til klyngedannelse af et stort antal korte DNA-sekvenser. Klyngerne oprettes på en måde så »radiussen« for hver klynge ikke er større end den angivne tærskel.

Inddatasekvenserne der skal indgå i klyngedannelsen skal være i formatet Fasta. Id'en for hver sekvens er baseret på det første ord i sekvensen i formatet Fasta. Det første ord er præfikset for teksthovedet til den første forekomst af mellemrum i teksthovedet.

Tags: Biology: Fasta/Pearson, Nucleic Acids, Field: field::biology, field::biology:bioinformatics, Implemented in: C++, Role: role::program, works-with::biological-sequence

Other Packages Related to dnaclust

depends

recommends

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dep: libboost-program-options1.74.0 (>= 1.74.0) [riscv64]

bibliotek til programindstillinger for C++
dep: libboost-program-options1.83.0 (>= 1.83.0) [not riscv64]

bibliotek til programindstillinger for C++
dep: libc6 (>= 2.34) [not alpha, ia64, sh4]

GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.37) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, mips64el, ppc64, ppc64el, s390x, x32]

GCC støttebibliotek

dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [ia64]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC støttebibliotek
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC støttebibliotek
dep: libstdc++6 (>= 11) [riscv64]

GNU Standard C++ bibliotek v3

dep: libstdc++6 (>= 13.1) [not arm64, riscv64, x32]

dep: libstdc++6 (>= 14) [arm64, x32]
dep: libunwind8 [ia64]

Bibliotek til at bestemme call-chain for et program - kørselstid

Download dnaclust

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	3-7+b4	109.6 kB	735.0 kB	[list of files]
amd64	3-7+b3	111.9 kB	681.0 kB	[list of files]
arm64	3-7+b4	105.2 kB	733.0 kB	[list of files]
armel	3-7+b3	101.5 kB	646.0 kB	[list of files]
armhf	3-7+b3	101.2 kB	582.0 kB	[list of files]
hppa (unofficial port)	3-7+b3	107.5 kB	672.0 kB	[list of files]
i386	3-7+b3	115.6 kB	678.0 kB	[list of files]
ia64 (unofficial port)	3-7+b3	124.5 kB	904.0 kB	[list of files]
m68k (unofficial port)	3-7+b3	109.9 kB	666.0 kB	[list of files]
mips64el	3-7+b3	112.2 kB	880.0 kB	[list of files]
ppc64 (unofficial port)	3-7+b3	115.9 kB	861.0 kB	[list of files]
ppc64el	3-7+b3	114.6 kB	861.0 kB	[list of files]
riscv64 (unofficial port)	3-7+b3	103.9 kB	623.0 kB	[list of files]
s390x	3-7+b3	115.3 kB	701.0 kB	[list of files]
sh4 (unofficial port)	3-7+b3	117.5 kB	732.0 kB	[list of files]
sparc64 (unofficial port)	3-7+b3	99.6 kB	3,494.0 kB	[list of files]
x32 (unofficial port)	3-7+b4	111.5 kB	650.0 kB	[list of files]