Package: bedtools (2.31.1+dfsg-2 and others)

Links for bedtools

Debian Resources:

Download Source Package bedtools:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Andreas Tille (QA Page)
Étienne Mollier (QA Page)

External Resources:

Homepage [github.com]

Similar packages:

Programpakke med redskaber for sammenligning af arvemassefunktioner

BEDTools-redskaber giver mulighed for at adressere gængse arvemasseopgaver såsom at finde funktionsoverlap og beregne dækning. Redskaberne er hovedsagelig baseret på fire meget udbredte filformater: BED, GFF/GTF, VCF og SAM/BAM. Med brug af BEDTools kan du udvikle sofistikerede datakanaler, som besvarer komplicerede forskningsspørgsmål ved at udsende flere BEDTools sammen.

Redskabet groupBy er distribueret i pakken filo.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

Other Packages Related to bedtools

depends

recommends

suggests

enhances

dep: libbz2-1.0 [not sparc64]

højkvalitets bloksorteringsfilpakningsbibliotek - kørselstid
dep: libc6 (>= 2.23) [sparc64]

GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.34) [not alpha, arm64, ia64, sh4, sparc64]

dep: libc6 (>= 2.37) [sh4]

dep: libc6 (>= 2.38) [arm64]
dep: libc6.1 (>= 2.34) [alpha]

GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libgcc-s1 (>= 3.0) [amd64, s390x, x32]

GCC støttebibliotek

dep: libgcc-s1 (>= 3.4) [alpha]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [arm64, ia64, mips64el, ppc64, ppc64el, riscv64, sh4]

dep: libgcc-s1 (>= 7) [i386]
dep: libgcc-s2 (>= 4.2.1) [m68k]

GCC støttebibliotek
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC støttebibliotek
dep: libgcc1 (>= 1:3.4) [sparc64]

Package not available
dep: liblzma5 (>= 5.1.1alpha+20120614) [not sparc64]

Kompressionsbibliotek for XZ-formatet
dep: libstdc++6 (>= 13.1) [not sparc64]

GNU Standard C++ bibliotek v3

dep: libstdc++6 (>= 5.2) [sparc64]
dep: libunwind8 [ia64]

Bibliotek til at bestemme call-chain for et program - kørselstid
dep: zlib1g (>= 1:1.1.4) [not sparc64]

Komprimeringsbibliotek - kørselstid

dep: zlib1g (>= 1:1.2.3.3) [sparc64]

Download bedtools

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.31.1+dfsg-2	608.1 kB	2,458.0 kB	[list of files]
amd64	2.31.1+dfsg-2	661.8 kB	2,106.0 kB	[list of files]
arm64	2.31.1+dfsg-2+b1	586.6 kB	2,007.0 kB	[list of files]
armel	2.31.1+dfsg-2	547.2 kB	1,817.0 kB	[list of files]
armhf	2.31.1+dfsg-2	564.5 kB	1,313.0 kB	[list of files]
hppa (unofficial port)	2.31.1+dfsg-2	621.0 kB	1,976.0 kB	[list of files]
i386	2.31.1+dfsg-2	727.9 kB	2,301.0 kB	[list of files]
ia64 (unofficial port)	2.31.1+dfsg-2	796.8 kB	4,272.0 kB	[list of files]
m68k (unofficial port)	2.31.1+dfsg-2	623.5 kB	2,045.0 kB	[list of files]
mips64el	2.31.1+dfsg-2	582.9 kB	2,599.0 kB	[list of files]
ppc64 (unofficial port)	2.31.1+dfsg-2	658.7 kB	2,710.0 kB	[list of files]
ppc64el	2.31.1+dfsg-2	664.1 kB	2,518.0 kB	[list of files]
riscv64	2.31.1+dfsg-2+b2	644.0 kB	1,603.0 kB	[list of files]
s390x	2.31.1+dfsg-2	646.6 kB	2,162.0 kB	[list of files]
sh4 (unofficial port)	2.31.1+dfsg-2	752.8 kB	1,942.0 kB	[list of files]
sparc64 (unofficial port)	2.26.0+dfsg-5	460.9 kB	1,898.0 kB	[list of files]
x32 (unofficial port)	2.31.1+dfsg-2	665.9 kB	2,001.0 kB	[list of files]