всички настройки
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Източник: minia  ]

Пакет: minia (3.2.6-3)

Връзки за minia

Screenshot

Ресурси за Debian:

Изтегляне на пакет-източник minia.

Отговорници:

Външни препратки:

Подобни пакети:

short-read biological sequence assembler

What was referred to as "next-generation" DNA sequencing up to the year 2020 delivered only "short" reads up to ~600 base pairs in length that would then have to be puzzled by random overlaps in their sequence towards a complete genome. This is the genome assembly. And there are many biological pitfalls on long stretches of low complexity regions and copy number variations and other sorts of redundancies that render this difficult.

This package provides a short-read DNA sequence assembler based on a de Bruijn graph, capable of assembling a human genome on a desktop computer in a day.

The output of Minia is a set of contigs, i.e. stretches of gap-free linear overlaps of short reads. In the best possible case this is a whole chromosome.

Minia produces results of similar contiguity and accuracy to other de Bruijn assemblers (e.g. Velvet).

Други пакети, свързани с minia

  • зависимости
  • препоръчани
  • предложени
  • enhances

Изтегляне на minia

Изтегляне за всички налични архитектури
Архитектура Големина на пакета Големина след инсталиране Файлове
ppc64el 393,8 кБ824,0 кБ [списък на файловете]