套件：stacks（2.55+dfsg-1）

stacks 的相關連結

Debian 的資源：

下載原始碼套件 stacks：

維護小組：

外部的資源：

主頁 [creskolab.uoregon.edu]

相似套件：

pipeline for building loci from short-read DNA sequences

Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>

其他與 stacks 有關的套件

依賴

推薦

建議

增強

dep: libc6 (>= 2.29)

GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
dep: libdbi-perl

Perl Database Interface (DBI)
dep: libgcc-s1 (>= 3.0) [除 armel, armhf, ppc64el]

GCC 支援函式庫

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libhts3 (>= 1.10)

C library for high-throughput sequencing data formats
dep: libstdc++6 (>= 9)

GNU Standard C++ Library v3
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats
dep: zlib1g (>= 1:1.2.6)

壓縮函式庫 - 跑程式時用(runtime)

rec: libspreadsheet-writeexcel-perl

module to create Excel spreadsheets
rec: littler

GNU R scripting and command-line front-end -- transition package
同時作為一個虛擬套件由這些套件填實： r-cran-littler
rec: python3

interactive high-level object-oriented language (default python3 version)

下載 stacks

下載可用於所有硬體架構的
硬體架構	套件大小	安裝後大小	檔案
amd64	1，041。1 kB	5，465。0 kB	[檔案列表]
arm64	910。1 kB	4，849。0 kB	[檔案列表]
armel	875。0 kB	4，664。0 kB	[檔案列表]
armhf	900。6 kB	3，312。0 kB	[檔案列表]
i386	1，112。2 kB	5，680。0 kB	[檔案列表]
mips64el	990。5 kB	6，867。0 kB	[檔案列表]
mipsel	1，014。9 kB	6，522。0 kB	[檔案列表]
ppc64el	1，033。4 kB	6，741。0 kB	[檔案列表]
s390x	912。5 kB	5，601。0 kB	[檔案列表]