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[ 原始碼: murasaki  ]

套件:murasaki(1.68.6-12)

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homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

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下載 murasaki

下載可用於所有硬體架構的
硬體架構 套件大小 安裝後大小 檔案
amd64 509。4 kB3,247。0 kB [檔案列表]
arm64 445。1 kB2,871。0 kB [檔案列表]
armel 369。5 kB2,377。0 kB [檔案列表]
armhf 378。9 kB1,689。0 kB [檔案列表]
i386 526。6 kB3,105。0 kB [檔案列表]
mips64el 481。2 kB3,955。0 kB [檔案列表]
mipsel 474。4 kB3,599。0 kB [檔案列表]
ppc64el 504。5 kB4,235。0 kB [檔案列表]
s390x 451。1 kB3,355。0 kB [檔案列表]