软件包：sga（0.10.15-7 以及其他的）

sga 的相关链接

Debian 的资源：

下载源码包 sga：

维护小组：

外部的资源：

主页 [github.com]

相似软件包：

de novo genome assembler that uses string graphs

The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads.

SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers' string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.

其他与 sga 有关的软件包

依赖

推荐

建议

增强

dep: libbamtools2.5.2 (>= 2.5.2+dfsg)

dynamic library for manipulating BAM (genome alignment) files
dep: libc6 (>= 2.34)

GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64el]

GCC 支持库

dep: libgcc-s1 (>= 3.4) [riscv64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 7) [i386]
dep: libgomp1 (>= 6)

GCC OpenMP（GOMP）支持库
dep: libstdc++6 (>= 11) [除 riscv64]

GNU 标准 C++ 库，第3版

dep: libstdc++6 (>= 13.1) [riscv64]
dep: perl

拉里沃尔的实用报表提取语言(Perl)
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
dep: python3-ruffus

Python3 computation pipeline library widely used in bioinformatics
dep: samtools

processing sequence alignments in SAM, BAM and CRAM formats
dep: zlib1g (>= 1:1.1.4)

压缩库 - 运行时

rec: abyss

de novo, parallel, sequence assembler for short reads

下载 sga

下载可用于所有硬件架构的
硬件架构	版本	软件包大小	安装后大小	文件
amd64	0.10.15-7+b1	812.5 kB	2,432.0 kB	[文件列表]
arm64	0.10.15-7+b1	580.5 kB	1,792.0 kB	[文件列表]
armel	0.10.15-7+b1	564.3 kB	1,727.0 kB	[文件列表]
armhf	0.10.15-7+b1	582.9 kB	1,279.0 kB	[文件列表]
i386	0.10.15-7+b1	876.3 kB	2,607.0 kB	[文件列表]
mips64el	0.10.15-7+b1	745.3 kB	3,062.0 kB	[文件列表]
ppc64el	0.10.15-7+b1	692.6 kB	2,304.0 kB	[文件列表]
riscv64	0.10.15-7+b1	663.5 kB	1,496.0 kB	[文件列表]