软件包：spaln（2.4.1+dfsg-3）

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主页 [www.genome.ist.i.kyoto-u.ac.jp]

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splicing-aware transcript-alignment to genomic DNA

Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.

spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.

其他与 spaln 有关的软件包

依赖

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建议

增强

dep: libc6 (>= 2.29)

GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
dep: libgcc-s1 (>= 3.3.1) [除 armel, armhf]

GCC 支持库

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libstdc++6 (>= 5)

GNU 标准 C++ 库，第3版
dep: spaln-data

splicing-aware transcript-alignment to genomic DNA (data)
dep: zlib1g (>= 1:1.2.0.2)

压缩库 - 运行时

下载 spaln

下载可用于所有硬件架构的
硬件架构	软件包大小	安装后大小	文件
amd64	345.1 kB	855.0 kB	[文件列表]
arm64	311.5 kB	775.0 kB	[文件列表]
armel	296.6 kB	781.0 kB	[文件列表]
armhf	303.3 kB	589.0 kB	[文件列表]
i386	349.5 kB	881.0 kB	[文件列表]
mips64el	330.2 kB	955.0 kB	[文件列表]
mipsel	323.5 kB	895.0 kB	[文件列表]
ppc64el	360.1 kB	1,120.0 kB	[文件列表]
s390x	349.1 kB	1,003.0 kB	[文件列表]