软件包:parallel-fastq-dump(0.6.6-3)
parallel-fastq-dump 的相关链接
Debian 的资源:
下载源码包 parallel-fastq-dump:
- [parallel-fastq-dump_0.6.6-3.dsc]
- [parallel-fastq-dump_0.6.6.orig.tar.gz]
- [parallel-fastq-dump_0.6.6-3.debian.tar.xz]
维护小组:
外部的资源:
- 主页 [github.com]
相似软件包:
parallel fastq-dump wrapper
NCBI fastq-dump can be very slow sometimes, even if you have the resources (network, IO, CPU) to go faster, even if you already downloaded the sra file (see the protip below). This tool speeds up the process by dividing the work into multiple threads.
This is possible because fastq-dump have options (-N and -X) to query specific ranges of the sra file, this tool works by dividing the work into the requested number of threads, running multiple fastq-dump in parallel and concatenating the results back together, as if you had just executed a plain fastq-dump call.
其他与 parallel-fastq-dump 有关的软件包
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- dep: python3
- 交互式高级面向对象语言(默认 python3 版本)
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- dep: sra-toolkit
- utilities for the NCBI Sequence Read Archive