Paket: r-bioc-rsamtools (2.18.0+dfsg-1 ve diğerleri)

r-bioc-rsamtools için bağlantılar

Debian Kaynakları:

r-bioc-rsamtools Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [bioconductor.org]

Benzer paketler:

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

r-bioc-rsamtools ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libbz2-1.0 [hppa, m68k, sh4, sparc64, x32 değil]

high-quality block-sorting file compressor library - runtime
dep: libc6 (>= 2.15) [m68k, sparc64]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb

dep: libc6 (>= 2.34) [alpha, ia64, m68k, sh4, sparc64 değil]

dep: libc6 (>= 2.37) [sh4]
dep: libc6.1 (>= 2.34) [alpha]

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb

dep: libc6.1 (>= 2.37) [ia64]
dep: libcurl4 (>= 7.18.0) [alpha, hppa, ia64, sh4, x32]

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libcurl4t64 (>= 7.18.0) [amd64, arm64, mips64el, ppc64, ppc64el, riscv64, s390x]

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]

GCC support library

dep: libgcc-s1 (>= 3.4) [alpha, riscv64]

dep: libgcc-s1 (>= 4.2) [ia64, sh4]
dep: libgcc-s4 (>= 4.1.1) [hppa]

GCC support library
dep: libgcc1 (>= 1:3.4) [sparc64]

Paket mevcut değil
dep: libgcc2 (>= 4.2.1) [m68k]

Paket mevcut değil
dep: libgomp1 (>= 4.2.1) [m68k, sparc64]

GCC OpenMP (GOMP) support library
dep: liblzma5 (>= 5.1.1alpha+20120614) [hppa, m68k, sh4, sparc64, x32 değil]

XZ-format compression library
dep: libstdc++6 (>= 11) [m68k, sparc64 değil]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 5.2) [m68k, sparc64]
dep: libunwind8 [ia64]

library to determine the call-chain of a program - runtime
dep: r-api-3.4 [m68k]

Paket mevcut değil
dep: r-api-3.5 [sparc64]

Paket mevcut değil
dep: r-api-4.0 [m68k, sparc64 değil]

sanal paketi sağlayan r-base-core
dep: r-api-bioc-3.16 [x32]

Paket mevcut değil
dep: r-api-bioc-3.18 [m68k, sparc64, x32 değil]

sanal paketi sağlayan r-bioc-biocgenerics
dep: r-api-bioc-3.8 [sparc64]

Paket mevcut değil
dep: r-base-core (>= 3.4.2-2) [m68k]

GNU R core of statistical computation and graphics system

dep: r-base-core (>= 3.5.2-1) [sparc64]

dep: r-base-core (>= 4.2.2.20221110-1) [x32]
dep: r-bioc-biocgenerics (>= 0.1.3) [m68k]

generic functions for Bioconductor

dep: r-bioc-biocgenerics (>= 0.25.1) [m68k değil]
dep: r-bioc-biocparallel

BioConductor facilities for parallel evaluation
dep: r-bioc-biostrings (>= 2.37.1) [m68k]

GNU R string objects representing biological sequences

dep: r-bioc-biostrings (>= 2.47.6) [m68k değil]
dep: r-bioc-genomeinfodb (>= 1.1.3)

BioConductor utilities for manipulating chromosome identifiers
dep: r-bioc-genomicranges (>= 1.21.6) [m68k]

BioConductor representation and manipulation of genomic intervals

dep: r-bioc-genomicranges (>= 1.31.8) [m68k değil]
dep: r-bioc-iranges (>= 2.13.12) [m68k değil]

GNU R low-level containers for storing sets of integer ranges

dep: r-bioc-iranges (>= 2.3.7) [m68k]
dep: r-bioc-rhtslib (>= 1.99.3) [m68k, sparc64 değil]

HTSlib high-throughput sequencing library as GNU R package
dep: r-bioc-s4vectors (>= 0.13.8) [m68k]

BioConductor S4 implementation of vectors and lists

dep: r-bioc-s4vectors (>= 0.17.25) [m68k değil]
dep: r-bioc-xvector (>= 0.15.1) [m68k]

BioConductor representation and manpulation of external sequences

dep: r-bioc-xvector (>= 0.19.7) [m68k değil]
dep: r-bioc-zlibbioc [m68k değil]

(Virtual) zlibbioc Bioconductor package
dep: r-cran-bitops

GNU R package implementing bitwise operations
dep: zlib1g (>= 1:1.2.3.3) [hppa, sh4, x32 değil]

compression library - runtime

rec: r-bioc-shortread

GNU R classes and methods for high-throughput short-read sequencing data
rec: r-cran-runit

GNU R package providing unit testing framework

sug: r-bioc-biocstyle [m68k, sparc64 değil]

standard styles for vignettes and other Bioconductor documents
sug: r-bioc-genomicalignments

BioConductor representation and manipulation of short genomic alignments
sug: r-bioc-genomicfeatures

GNU R tools for making and manipulating transcript centric annotations
sug: r-bioc-shortread (>= 1.19.10) [sparc64 değil]

GNU R classes and methods for high-throughput short-read sequencing data
sug: r-cran-knitr [m68k, sparc64, x32 değil]

GNU R package for dynamic report generation using Literate Programming
sug: r-cran-runit [sparc64 değil]

GNU R package providing unit testing framework

r-bioc-rsamtools indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
alpha (resmi olmayan port)	2.18.0+dfsg-1+b1	3.499,6 kB	5.779,0 kB	[dosya listesi]
amd64	2.18.0+dfsg-1+b1	3.500,1 kB	5.581,0 kB	[dosya listesi]
arm64	2.18.0+dfsg-1+b1	3.456,7 kB	5.585,0 kB	[dosya listesi]
hppa (resmi olmayan port)	2.18.0+dfsg-1	3.506,9 kB	5.731,0 kB	[dosya listesi]
ia64 (resmi olmayan port)	2.18.0+dfsg-1+b1	3.636,0 kB	6.843,0 kB	[dosya listesi]
m68k (resmi olmayan port)	1.30.0-1	3.206,0 kB	5.170,0 kB	[dosya listesi]
mips64el	2.18.0+dfsg-1+b1	3.452,0 kB	5.771,0 kB	[dosya listesi]
ppc64 (resmi olmayan port)	2.18.0+dfsg-1+b1	3.537,8 kB	6.173,0 kB	[dosya listesi]
ppc64el	2.18.0+dfsg-1+b1	3.545,3 kB	5.969,0 kB	[dosya listesi]
riscv64	2.18.0+dfsg-1+b2	3.518,6 kB	5.393,0 kB	[dosya listesi]
s390x	2.18.0+dfsg-1+b1	3.509,8 kB	5.713,0 kB	[dosya listesi]
sh4 (resmi olmayan port)	2.18.0+dfsg-1	3.552,9 kB	5.453,0 kB	[dosya listesi]
sparc64 (resmi olmayan port)	1.34.1-1	3.424,1 kB	5.736,0 kB	[dosya listesi]
x32 (resmi olmayan port)	2.14.0-1	3.666,4 kB	5.700,0 kB	[dosya listesi]