[ Källkod: ampliconnoise ]
Paket: ampliconnoise (1.29-11)
Länkar för ampliconnoise
Debianresurser:
Hämta källkodspaketet ampliconnoise:
Ansvariga:
- Debian Med Packaging Team (QA-sida, E-postarkiv)
- Tim Booth (QA-sida)
- Andreas Tille (QA-sida)
- Pranav Ballaney (QA-sida)
Externa resurser:
- Hemsida [github.com]
Liknande paket:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Andra paket besläktade med ampliconnoise
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- dep: libc6 (>= 2.34) [ej alpha, ia64, sh4]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.7.1) [sparc64]
- GNU Scientific Library (GSL) -- blas library package
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- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: openmpi-bin
- high performance message passing library -- binaries
Hämta ampliconnoise
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| alpha (inofficiell anpassning) | 1.073,8 kbyte | 2.525,0 kbyte | [filförteckning] |
| amd64 | 1.086,3 kbyte | 2.037,0 kbyte | [filförteckning] |
| arm64 | 1.075,1 kbyte | 2.397,0 kbyte | [filförteckning] |
| armel | 1.066,5 kbyte | 1.956,0 kbyte | [filförteckning] |
| armhf | 1.061,5 kbyte | 1.824,0 kbyte | [filförteckning] |
| hppa (inofficiell anpassning) | 1.062,8 kbyte | 1.925,0 kbyte | [filförteckning] |
| i386 | 1.077,3 kbyte | 2.000,0 kbyte | [filförteckning] |
| ia64 (inofficiell anpassning) | 1.096,8 kbyte | 2.314,0 kbyte | [filförteckning] |
| m68k (inofficiell anpassning) | 1.060,0 kbyte | 1.928,0 kbyte | [filförteckning] |
| mips64el | 1.072,6 kbyte | 2.419,0 kbyte | [filförteckning] |
| ppc64 (inofficiell anpassning) | 1.089,0 kbyte | 2.589,0 kbyte | [filförteckning] |
| ppc64el | 1.094,5 kbyte | 2.589,0 kbyte | [filförteckning] |
| riscv64 | 1.082,4 kbyte | 1.905,0 kbyte | [filförteckning] |
| s390x | 1.098,1 kbyte | 2.085,0 kbyte | [filförteckning] |
| sh4 (inofficiell anpassning) | 1.094,3 kbyte | 2.384,0 kbyte | [filförteckning] |
| sparc64 (inofficiell anpassning) | 1.065,6 kbyte | 14.888,0 kbyte | [filförteckning] |
| x32 (inofficiell anpassning) | 1.083,2 kbyte | 1.992,0 kbyte | [filförteckning] |