[ Bron: ampliconnoise ]
Pakket: ampliconnoise (1.29-11)
Verwijzigingen voor ampliconnoise
Debian bronnen:
Het bronpakket ampliconnoise downloaden:
Beheerders:
- Debian Med Packaging Team (QA-pagina, Mailarchief)
- Tim Booth (QA-pagina)
- Andreas Tille (QA-pagina)
- Pranav Ballaney (QA-pagina)
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
Andere aan ampliconnoise gerelateerde pakketten
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- dep: libc6 (>= 2.34) [niet alpha, ia64, sh4]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 (>= 2.7.1) [sparc64]
- GNU Scientific Library (GSL) -- blas library package
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- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
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- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- rec: openmpi-bin
- high performance message passing library -- binaries
ampliconnoise downloaden
| Platform | Pakketgrootte | Geïnstalleerde grootte | Bestanden |
|---|---|---|---|
| alpha (unofficial port) | 1.073,8 kB | 2.525,0 kB | [overzicht] |
| amd64 | 1.086,3 kB | 2.037,0 kB | [overzicht] |
| arm64 | 1.075,1 kB | 2.397,0 kB | [overzicht] |
| armel | 1.066,5 kB | 1.956,0 kB | [overzicht] |
| armhf | 1.061,5 kB | 1.824,0 kB | [overzicht] |
| hppa (unofficial port) | 1.062,8 kB | 1.925,0 kB | [overzicht] |
| i386 | 1.077,3 kB | 2.000,0 kB | [overzicht] |
| ia64 (unofficial port) | 1.096,8 kB | 2.314,0 kB | [overzicht] |
| m68k (unofficial port) | 1.060,0 kB | 1.928,0 kB | [overzicht] |
| mips64el | 1.072,6 kB | 2.419,0 kB | [overzicht] |
| ppc64 (unofficial port) | 1.089,0 kB | 2.589,0 kB | [overzicht] |
| ppc64el | 1.094,5 kB | 2.589,0 kB | [overzicht] |
| riscv64 | 1.082,4 kB | 1.905,0 kB | [overzicht] |
| s390x | 1.098,1 kB | 2.085,0 kB | [overzicht] |
| sh4 (unofficial port) | 1.094,3 kB | 2.384,0 kB | [overzicht] |
| sparc64 (unofficial port) | 1.065,6 kB | 14.888,0 kB | [overzicht] |
| x32 (unofficial port) | 1.083,2 kB | 1.992,0 kB | [overzicht] |