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[ Pakiet źródłowy: examl  ]

Pakiet: examl (3.0.22-5 i inne)

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Podobne pakiety:

Exascale Maximum Likelihood (ExaML) code for phylogenetic inference

Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees.

ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data.

ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency.

It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.

Inne pakiety związane z examl

  • wymaga
  • poleca
  • sugeruje
  • enhances

Pobieranie examl

Pobierz dla wszystkich dostępnych architektur
Architektura Wersja Rozmiar pakietu Rozmiar po instalacji Pliki
amd64 3.0.22-5+b1 938,7 KiB6 026,0 KiB [lista plików]
arm64 3.0.22-5+b1 778,7 KiB1 664,0 KiB [lista plików]
armel 3.0.22-5+b1 799,1 KiB1 873,0 KiB [lista plików]
armhf 3.0.22-5+b1 785,9 KiB1 513,0 KiB [lista plików]
i386 3.0.22-5+b1 1 079,1 KiB7 044,0 KiB [lista plików]
mips64el 3.0.22-5+b1 817,2 KiB1 812,0 KiB [lista plików]
ppc64el 3.0.22-5+b1 837,2 KiB1 792,0 KiB [lista plików]
riscv64 3.0.22-5+b1 835,2 KiB1 576,0 KiB [lista plików]
s390x 3.0.22-5+b1 825,9 KiB2 060,0 KiB [lista plików]