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[ Bron: samtools  ]

Pakket: samtools (1.11-1)

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processing sequence alignments in SAM, BAM and CRAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Networking: Client, Network Protocol: FTP, protocol::http, role::program, Scope: Utility, Interface Toolkit: Ncurses TUI, Purpose: use::analysing, use::calculating, Filtering, Works with: Biological Sequence

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samtools downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 531,8 kB1.201,0 kB [overzicht]
arm64 513,2 kB1.149,0 kB [overzicht]
armel 503,0 kB1.134,0 kB [overzicht]
armhf 507,0 kB978,0 kB [overzicht]
i386 562,3 kB1.306,0 kB [overzicht]
mips64el 518,2 kB1.281,0 kB [overzicht]
mipsel 525,7 kB1.240,0 kB [overzicht]
ppc64el 559,1 kB1.669,0 kB [overzicht]
s390x 512,5 kB1.229,0 kB [overzicht]