Pakket: bitseq (0.7.5+dfsg-5)

Verwijzigingen voor bitseq

Debian bronnen:

Het bronpakket bitseq downloaden:

Beheerders:

Debian Med Packaging Team (QA-pagina, Mailarchief)
Tim Booth (QA-pagina)
Andreas Tille (QA-pagina)

Externe bronnen:

Homepage [github.com]

Vergelijkbare pakketten:

Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

Andere aan bitseq gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libc6 (>= 2.23)

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
dep: libgcc1 (>= 1:3.0) [amd64, i386, mipsel, s390x]

Pakket niet beschikbaar

dep: libgcc1 (>= 1:3.4.4) [ppc64el]

dep: libgcc1 (>= 1:3.5) [armel, armhf]

dep: libgcc1 (>= 1:4.2) [arm64, mips64el]
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-numpy

Fast array facility to the Python 3 language
dep: zlib1g (>= 1:1.2.3.3)

compressiebibliotheek - programma's

sug: samtools

processing sequence alignments in SAM, BAM and CRAM formats

bitseq downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	339,9 kB	1.875,0 kB	[overzicht]
arm64	299,7 kB	1.651,0 kB	[overzicht]
armel	282,5 kB	1.522,0 kB	[overzicht]
armhf	288,6 kB	1.106,0 kB	[overzicht]
i386	358,3 kB	1.906,0 kB	[overzicht]
mips64el	329,5 kB	2.194,0 kB	[overzicht]
mipsel	330,5 kB	2.052,0 kB	[overzicht]
ppc64el	339,9 kB	2.407,0 kB	[overzicht]
s390x	299,3 kB	1.887,0 kB	[overzicht]