Pakket: bali-phy (3.6.0+dfsg-1)

Verwijzigingen voor bali-phy

Debian bronnen:

Het bronpakket bali-phy downloaden:

Beheerders:

Externe bronnen:

Homepage [www.bali-phy.org]

Vergelijkbare pakketten:

Bayesian Inference of Alignment and Phylogeny

BAli-Phy estimates multiple sequence alignments and evolutionary trees from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC to estimate evolutionary trees, positive selection, and branch lengths while averaging over alternative alignments. BAli-Phy can display alignment ambiguity graphically in an alignment uncertainty (AU) plot.

BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically estimates relative rates for each gene.

Andere aan bali-phy gerelateerde pakketten

depends

recommends

suggests

enhances

dep: libboost-chrono1.74.0 (>= 1.74.0)

C++ representation of time duration, time point, and clocks
dep: libboost-filesystem1.74.0 (>= 1.74.0)

filesystem operations (portable paths, iteration over directories, etc) in C++
dep: libboost-program-options1.74.0 (>= 1.74.0)

program options library for C++
dep: libboost-random1.74.0 (>= 1.74.0)

Boost Random Number Library
dep: libc6 (>= 2.29)

GNU C Bibliotheek: Gedeelde bibliotheken
Ook een virtueel pakket geboden door: libc6-udeb
dep: libcairo2 (>= 1.4.10)

Cairo 2D vector graphics library
dep: libgcc-s1 (>= 3.0) [s390x]

GCC support bibliotheek

dep: libgcc-s1 (>= 3.4) [amd64]

dep: libgcc-s1 (>= 3.5) [armel, armhf]

dep: libgcc-s1 (>= 4.2) [i386, mipsel, ppc64el]

dep: libgcc-s1 (>= 4.5) [arm64, mips64el]
dep: libstdc++6 (>= 9)

GNU Standard C++ Library v3
dep: perl

Larry Wall's Practical Extraction and Report Language
dep: python3

interactive high-level object-oriented language (default python3 version)

rec: gnuplot

Command-line driven interactive plotting program.
Ook een virtueel pakket geboden door: gnuplot-nox, gnuplot-qt, gnuplot-x11
rec: r-base

GNU R statistical computation and graphics system

sug: figtree

graphical phylogenetic tree viewer
sug: seaview

Multiplatform interface for sequence alignment and phylogeny

bali-phy downloaden

Pakket downloaden voor alle beschikbare platforms
Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	6.034,2 kB	35.682,0 kB	[overzicht]
arm64	5.431,3 kB	32.438,0 kB	[overzicht]
armel	4.564,5 kB	29.752,0 kB	[overzicht]
armhf	4.260,7 kB	22.024,0 kB	[overzicht]
i386	5.831,4 kB	35.044,0 kB	[overzicht]
mips64el	5.573,4 kB	42.247,0 kB	[overzicht]
mipsel	5.537,4 kB	40.464,0 kB	[overzicht]
ppc64el	6.131,2 kB	40.892,0 kB	[overzicht]
s390x	4.991,8 kB	35.522,0 kB	[overzicht]