Package: boxshade (3.3.1-14 and others)

Links for boxshade

Debian Resources:

Download Source Package boxshade:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Steffen Moeller (QA Page)
Charles Plessy (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [www.ch.embnet.org]

Similar packages:

belle stampe di allineamenti multisequenza

Boxshade è un programma per creare stampe di bell'aspetto a partire da sequenze proteiche o di DNA multi-allineate. Il programma non fa il reale allineamento e necessita di un file input creato da un programma per allineamenti multipli o creato a mano con strumenti adatti.

Boxshade legge sequenze multiallineate da file PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data e ESEE-save, (limitatamente ad un massimo di 150 sequenze con fino a 10.000 elementi ciascuna). Vari tipi di ombreggiatura possono essere applicati a residui identici/simili. L'output è scritto a schermo o in un file nei seguenti formati: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: scope::utility, use::typesetting, Supports Format: works-with-format::html, works-with-format::plaintext, works-with-format::postscript, works-with-format::tex, Works with: Need an extra tag, Text

Other Packages Related to boxshade

depends

recommends

suggests

enhances

dep: libc6 (>= 2.11) [hppa]

Libreria C GNU: librerie condivise
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.14) [amd64]

dep: libc6 (>= 2.16) [x32]

dep: libc6 (>= 2.17) [ppc64el]

dep: libc6 (>= 2.31) [sh4]

dep: libc6 (>= 2.34) [arm64, riscv64]

dep: libc6 (>= 2.7) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]
dep: libc6.1 (>= 2.31) [ia64]

Libreria C GNU: librerie condivise
also a virtual package provided by libc6.1-udeb

dep: libc6.1 (>= 2.7) [alpha]

sug: kalign

allineamenti multipli di sequenza globali e progressivi

or clustalw

allineamento globale per sequenze multiple di nucleotidi o peptidi

or mafft

programma per allineamenti multipli per sequenze aminoacidiche o nucleotidiche

or hmmer

profilamento di modelli di Markov nascosti per analisi di sequenze proteiche
sug: seaview

interfaccia multipiattaforma per l'allineamento di sequenze e filogenia
sug: texlive-latex-extra

TeX Live: LaTeX additional packages
sug: xfig

strumento per generazione interattiva di figure in X11

Download boxshade

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	3.3.1-14	57.3 kB	185.0 kB	[list of files]
amd64	3.3.1-14	54.5 kB	161.0 kB	[list of files]
arm64	3.3.1-14+b1	50.4 kB	192.0 kB	[list of files]
armel	3.3.1-14	54.6 kB	163.0 kB	[list of files]
armhf	3.3.1-14	52.9 kB	135.0 kB	[list of files]
hppa (unofficial port)	3.3.1-14	52.0 kB	157.0 kB	[list of files]
i386	3.3.1-14	56.0 kB	176.0 kB	[list of files]
ia64 (unofficial port)	3.3.1-14	68.1 kB	277.0 kB	[list of files]
m68k (unofficial port)	3.3.1-14	53.0 kB	167.0 kB	[list of files]
mips64el	3.3.1-14	53.3 kB	187.0 kB	[list of files]
ppc64 (unofficial port)	3.3.1-14	56.1 kB	193.0 kB	[list of files]
ppc64el	3.3.1-14	56.4 kB	193.0 kB	[list of files]
riscv64	3.3.1-14+b2	52.7 kB	152.0 kB	[list of files]
s390x	3.3.1-14	52.9 kB	168.0 kB	[list of files]
sh4 (unofficial port)	3.3.1-14	60.8 kB	156.0 kB	[list of files]
sparc64 (unofficial port)	3.3.1-14	50.4 kB	170.0 kB	[list of files]
x32 (unofficial port)	3.3.1-14	54.4 kB	160.0 kB	[list of files]