[ Source: seqan-raptor ]
Package: seqan-raptor (3.0.1+ds-5 and others)
Links for seqan-raptor
Debian Resources:
Download Source Package seqan-raptor:
- [seqan-raptor_3.0.1+ds-5.dsc]
- [seqan-raptor_3.0.1+ds.orig.tar.xz]
- [seqan-raptor_3.0.1+ds-5.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
pre-filter for querying very large collections of nucleotide sequences
Raptor is a system for approximately searching many queries such as next-generation sequencing reads or transcripts in large collections of nucleotide sequences. Raptor uses winnowing minimizers to define a set of representative k-mers, an extension of the interleaved Bloom filters (IBFs) as a set membership data structure and probabilistic thresholding for minimizers. This approach allows compression and partitioning of the IBF to enable the effective use of secondary memory.
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Download seqan-raptor
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 3.0.1+ds-5 | 579.4 kB | 2,362.0 kB | [list of files] |
| amd64 | 3.0.1+ds-5 | 646.1 kB | 2,087.0 kB | [list of files] |
| arm64 | 3.0.1+ds-5+b1 | 575.5 kB | 1,976.0 kB | [list of files] |
| ia64 (unofficial port) | 2.0.0.0.git.fecfbca+ds-3 | 695.6 kB | 4,733.0 kB | [list of files] |
| mips64el | 3.0.1+ds-5 | 529.1 kB | 2,319.0 kB | [list of files] |
| ppc64 (unofficial port) | 3.0.0+ds-2 | 458.7 kB | 1,831.0 kB | [list of files] |
| ppc64el | 3.0.1+ds-5 | 633.6 kB | 2,359.0 kB | [list of files] |
| riscv64 | 3.0.1+ds-5+b1 | 620.9 kB | 1,560.0 kB | [list of files] |
| sparc64 (unofficial port) | 3.0.1+ds-2 | 473.3 kB | 2,111.0 kB | [list of files] |