Paketti: sniffles (2.2-1)

Links for sniffles

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

cutesv
pbsuite
python-pbsuite-utils
python3-pbsuite-utils
ngmlr
python3-nanoget
nanopolish
tiddit
racon
unanimity
art-nextgen-simulation-tools

structural variation caller using third-generation sequencing

Sniffles is a structural variation (SV) caller using third-generation sequencing data such as those from Pacific Biosciences or Oxford Nanopore platforms. It detects all types of SVs using evidence from split-read alignments, high-mismatch regions, and coverage analysis.

Muut pakettiin sniffles liittyvät paketit

depends

recommends

suggests

enhances

dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)

sug: bwa

Burrows-Wheeler Aligner

Imuroi sniffles

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	43.8 kt	224.0 kt	[tiedostoluettelo]