Paketti: libvcflib-tools (1.0.2+dfsg-2)

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Imuroi lähdekoodipaketti libvcflib:

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Samankaltaisia paketteja:

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

Muut pakettiin libvcflib-tools liittyvät paketit

depends

recommends

suggests

enhances

dep: libc6 (>= 2.29)

GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f+dfsg-5~) [amd64, arm64, mips64el, ppc64el]

library for indexing and sequence extraction from FASTA files (lib)

dep: libfastahack0 (>= 1.0.0+dfsg) [ei amd64, arm64, mips64el, ppc64el]
dep: libgcc-s1 (>= 3.0) [ei armel, armhf, ppc64el]

GCC:n apukirjasto

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armel, armhf]
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 5.2) [armel, armhf]

GNU standardi C++ -kirjasto, versio 3

dep: libstdc++6 (>= 9) [ei armel, armhf]
dep: libtabixpp0 (>= 1.0.0)

C++ wrapper to tabix indexer
dep: libvcflib1 (>= 1.0.2+dfsg)

C++ library for parsing and manipulating VCF files
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: r-base-core

GNU R core of statistical computation and graphics system
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-gridbase

GNU R Integration of base and grid graphics
dep: r-cran-plyr

tools for splitting, applying and combining data

sug: r-cran-pracma

practical numerical math functions for GNU R

Imuroi libvcflib-tools

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	703.5 kt	4,707.0 kt	[tiedostoluettelo]
arm64	641.8 kt	4,099.0 kt	[tiedostoluettelo]
armel	604.0 kt	3,654.0 kt	[tiedostoluettelo]
armhf	624.0 kt	2,950.0 kt	[tiedostoluettelo]
i386	741.8 kt	4,758.0 kt	[tiedostoluettelo]
mips64el	633.4 kt	4,721.0 kt	[tiedostoluettelo]
mipsel	639.3 kt	4,453.0 kt	[tiedostoluettelo]
ppc64el	703.5 kt	7,435.0 kt	[tiedostoluettelo]
s390x	647.7 kt	4,471.0 kt	[tiedostoluettelo]