Package: samtools (1.19.2-1 and others)
Links for samtools
Debian Resources:
Download Source Package samtools:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Charles Plessy (QA Page)
- Andreas Tille (QA Page)
- Étienne Mollier (QA Page)
External Resources:
- Homepage [www.htslib.org]
Similar packages:
processing sequence alignments in SAM, BAM and CRAM formats
Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server.
Other Packages Related to samtools
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- dep: libc6 (>= 2.34) [not alpha, ia64, sh4]
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- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
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- dep: libtinfo6 (>= 6)
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- dep: zlib1g (>= 1:1.1.4) [not armel, armhf, hppa, i386, m68k, sh4]
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Download samtools
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
alpha (unofficial port) | 1.19.2-1+b1 | 626.8 kB | 1,800.0 kB | [list of files] |
amd64 | 1.19.2-1+b1 | 630.1 kB | 1,393.0 kB | [list of files] |
arm64 | 1.19.2-1+b1 | 602.6 kB | 1,669.0 kB | [list of files] |
armel | 1.19.2-1+b1 | 596.5 kB | 1,318.0 kB | [list of files] |
armhf | 1.19.2-1+b1 | 599.6 kB | 1,134.0 kB | [list of files] |
hppa (unofficial port) | 1.19.2-1+b1 | 627.8 kB | 1,355.0 kB | [list of files] |
i386 | 1.19.2-1+b1 | 665.6 kB | 1,518.0 kB | [list of files] |
ia64 (unofficial port) | 1.19.2-1+b1 | 716.1 kB | 2,112.0 kB | [list of files] |
m68k (unofficial port) | 1.19.2-1+b1 | 607.6 kB | 1,342.0 kB | [list of files] |
mips64el | 1.19.2-1+b1 | 609.1 kB | 1,819.0 kB | [list of files] |
ppc64 (unofficial port) | 1.19.2-1+b1 | 647.0 kB | 1,925.0 kB | [list of files] |
ppc64el | 1.19.2-1+b1 | 656.9 kB | 1,925.0 kB | [list of files] |
riscv64 | 1.19.2-1+b1 | 640.5 kB | 1,265.0 kB | [list of files] |
s390x | 1.19.2-1+b1 | 637.7 kB | 1,469.0 kB | [list of files] |
sh4 (unofficial port) | 1.19.2-1+b1 | 687.0 kB | 1,600.0 kB | [list of files] |
sparc64 (unofficial port) | 1.19.2-1+b1 | 596.4 kB | 7,761.0 kB | [list of files] |
x32 (unofficial port) | 1.19.2-1+b1 | 635.4 kB | 1,358.0 kB | [list of files] |