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[ Quellcode: seqtools  ]

Paket: blixem (4.44.1+dfsg-6 und andere)

Links für blixem

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Quellcode-Paket seqtools herunterladen:

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interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Markierungen: GUI-Baukasten: GTK

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Download für alle verfügbaren Architekturen
Architektur Version Paketgröße Größe (installiert) Dateien
amd64 4.44.1+dfsg-6+b1 1.358,0 kB2.256,0 kB [Liste der Dateien]
arm64 4.44.1+dfsg-6+b1 1.320,3 kB2.202,0 kB [Liste der Dateien]
armel 4.44.1+dfsg-6+b1 1.299,1 kB2.072,0 kB [Liste der Dateien]
armhf 4.44.1+dfsg-6+b1 1.305,6 kB1.820,0 kB [Liste der Dateien]
i386 4.44.1+dfsg-6+b1 1.372,7 kB2.424,0 kB [Liste der Dateien]
mips64el 4.44.1+dfsg-6+b1 1.343,4 kB2.639,0 kB [Liste der Dateien]
mipsel 4.44.1+dfsg-6+b1 1.349,7 kB2.561,0 kB [Liste der Dateien]
ppc64el 4.44.1+dfsg-6+b1 1.358,2 kB2.676,0 kB [Liste der Dateien]
s390x 4.44.1+dfsg-6+b1 1.321,3 kB2.306,0 kB [Liste der Dateien]