[ Source: quicktree ]
Package: quicktree (2.5-6 and others)
Links for quicktree
Debian Resources:
Download Source Package quicktree:
Maintainers:
External Resources:
- Homepage [github.com]
Similar packages:
Neighbor-Joining-algoritme for fylogenier
Quicktree er en effektiv implementering af Neighbor-Joining-algoritmen (PMID: 3447015), der kan rekonstruere fylogenier fra store sammenligninger i tid mindre end universets alder.
QuickTree accepterer både afstandsmatrix og data fra multiple-sequence-alignment. Den første skal være i PHYLIP-format. Den sidste skal være i Stockholm-format, der er standardformet for sammenligning for Pfam-databasen. Sammenligninger i forskellige formater kan konverteres til Stockholm-formatet via programmet sreformat, der er en del af pakken HMMer (hmmer.org).
Tress skrives til standardud, i Newick/New-Hampshire-formatet brugt af PHYLIP og mange andre programmer.
Other Packages Related to quicktree
|
|
|
|
-
- dep: libc6 (>= 2.34) [not alpha, ia64, sh4]
- GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C-bibliotek: Delte biblioteker
also a virtual package provided by libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
Download quicktree
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| alpha (unofficial port) | 2.5-6 | 21.4 kB | 85.0 kB | [list of files] |
| amd64 | 2.5-6 | 21.1 kB | 57.0 kB | [list of files] |
| arm64 | 2.5-6 | 19.7 kB | 84.0 kB | [list of files] |
| armel | 2.5-6 | 20.1 kB | 56.0 kB | [list of files] |
| armhf | 2.5-6 | 17.8 kB | 44.0 kB | [list of files] |
| hppa (unofficial port) | 2.5-6 | 19.8 kB | 52.0 kB | [list of files] |
| i386 | 2.5-6 | 21.8 kB | 60.0 kB | [list of files] |
| ia64 (unofficial port) | 2.5-6 | 26.1 kB | 93.0 kB | [list of files] |
| m68k (unofficial port) | 2.5-6 | 18.0 kB | 52.0 kB | [list of files] |
| mips64el | 2.5-6 | 21.5 kB | 87.0 kB | [list of files] |
| ppc64 (unofficial port) | 2.5-6 | 23.6 kB | 85.0 kB | [list of files] |
| ppc64el | 2.5-6 | 23.8 kB | 85.0 kB | [list of files] |
| riscv64 | 2.5-6+b1 | 21.6 kB | 53.0 kB | [list of files] |
| s390x | 2.5-6 | 21.2 kB | 60.0 kB | [list of files] |
| sh4 (unofficial port) | 2.5-6 | 21.3 kB | 84.0 kB | [list of files] |
| sparc64 (unofficial port) | 2.5-6 | 18.3 kB | 1,046.0 kB | [list of files] |
| x32 (unofficial port) | 2.5-6 | 21.1 kB | 56.0 kB | [list of files] |