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[ 原始碼: discosnp  ]

套件:discosnp(1:2.6.2-3 以及其他的)

discosnp 的相關連結

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下載原始碼套件 discosnp

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discovering Single Nucleotide Polymorphism from raw set(s) of reads

Software discoSnp is designed for discovering Single Nucleotide Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation Sequencers (NGS).

Note that number of input read sets is not constrained, it can be one, two, or more. Note also that no other data as reference genome or annotations are needed.

The software is composed by two modules. First module, kissnp2, detects SNPs from read sets. A second module, kissreads, enhance the kissnp2 results by computing per read set and for each found SNP:

 1) its mean read coverage
 2) the (phred) quality of reads generating the polymorphism.

This program is superseded by DiscoSnp++.

其他與 discosnp 有關的套件

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下載 discosnp

下載可用於所有硬體架構的
硬體架構 版本 套件大小 安裝後大小 檔案
ppc64el 1:2.6.2-3+b1 1,426。6 kB3,124。0 kB [檔案列表]