[ 原始碼： pbbam ]
套件：pbbamtools（2.4.0+dfsg-1 以及其他的）
processing Pacific Biosciences binary alignment/map files
The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.
PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.
This package provides command-line utilities for working with PacBio BAM files.
其他與 pbbamtools 有關的套件
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- dep: libc6 (>= 2.31) [sh4]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.34) [除 alpha, ia64, m68k, sh4]
- dep: libc6 (>= 2.4) [m68k]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: libgcc-s1 (>= 3.0) [除 ia64, m68k, sh4]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.3.4) [sh4]
- dep: libgcc-s1 (>= 4.2) [ia64]
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- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC 支援函式庫
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- dep: libhts3 (>= 1.10) [m68k, sh4]
- C library for high-throughput sequencing data formats
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- dep: libhts3t64 (>= 1.17) [除 m68k, sh4]
- C library for high-throughput sequencing data formats
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- dep: libpbbam1.3.0 (= 1.3.0+dfsg-2) [m68k, sh4]
- Pacific Biosciences binary alignment/map (BAM) library
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- dep: libpbbam2.4.0 (= 2.4.0+dfsg-1+b3) [除 m68k, sh4]
- Pacific Biosciences binary alignment/map (BAM) library
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- dep: libpbcopper1.3.0 (>= 1.4.0+dfsg) [m68k, sh4]
- data structures, algorithms, and utilities for C++ applications
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- dep: libpbcopper2.3.0 (>= 2.3.0+dfsg) [除 m68k, sh4]
- data structures, algorithms, and utilities for C++ applications
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- dep: libstdc++6 (>= 13.1) [除 m68k, sh4]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 5.2) [m68k, sh4]
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- rec: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
下載 pbbamtools
| 硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
|---|---|---|---|---|
| alpha （非官方移植版） | 2.4.0+dfsg-1+b3 | 120。9 kB | 686。0 kB | [檔案列表] |
| amd64 | 2.4.0+dfsg-1+b3 | 129。6 kB | 475。0 kB | [檔案列表] |
| arm64 | 2.4.0+dfsg-1+b3 | 115。8 kB | 619。0 kB | [檔案列表] |
| ia64 （非官方移植版） | 2.4.0+dfsg-1+b3 | 145。0 kB | 712。0 kB | [檔案列表] |
| m68k （非官方移植版） | 1.3.0+dfsg-2 | 79。1 kB | 274。0 kB | [檔案列表] |
| mips64el | 2.4.0+dfsg-1+b3 | 120。5 kB | 703。0 kB | [檔案列表] |
| ppc64el | 2.4.0+dfsg-1+b3 | 126。8 kB | 683。0 kB | [檔案列表] |
| riscv64 | 2.4.0+dfsg-1+b3 | 122。4 kB | 363。0 kB | [檔案列表] |
| sh4 （非官方移植版） | 1.3.0+dfsg-2 | 88。0 kB | 256。0 kB | [檔案列表] |