套件：examl（3.0.22-5）
Exascale Maximum Likelihood (ExaML) code for phylogenetic inference
Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees.
ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data.
ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency.
It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.
其他與 examl 有關的套件
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- dep: libc6 (>= 2.34) [除 alpha, ia64, sh4, x32]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.38) [x32]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: libgomp1 (>= 4.2.1) [sparc64]
- GCC OpenMP (GOMP) support library
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- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
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- dep: openmpi-bin
- high performance message passing library -- binaries
下載 examl
| 硬體架構 | 套件大小 | 安裝後大小 | 檔案 |
|---|---|---|---|
| alpha （非官方移植版） | 834。3 kB | 1，919。0 kB | [檔案列表] |
| amd64 | 931。6 kB | 5，969。0 kB | [檔案列表] |
| arm64 | 780。5 kB | 1，663。0 kB | [檔案列表] |
| armel | 796。9 kB | 1，872。0 kB | [檔案列表] |
| armhf | 785。1 kB | 1，520。0 kB | [檔案列表] |
| hppa （非官方移植版） | 813。5 kB | 1，750。0 kB | [檔案列表] |
| i386 | 1，078。8 kB | 7，035。0 kB | [檔案列表] |
| ia64 （非官方移植版） | 955。5 kB | 2，818。0 kB | [檔案列表] |
| m68k （非官方移植版） | 763。5 kB | 1，780。0 kB | [檔案列表] |
| mips64el | 816。6 kB | 1，811。0 kB | [檔案列表] |
| ppc64 （非官方移植版） | 836。8 kB | 1，919。0 kB | [檔案列表] |
| ppc64el | 845。9 kB | 1，919。0 kB | [檔案列表] |
| riscv64 | 840。2 kB | 1，591。0 kB | [檔案列表] |
| s390x | 818。0 kB | 1，995。0 kB | [檔案列表] |
| sh4 （非官方移植版） | 889。8 kB | 1，852。0 kB | [檔案列表] |
| sparc64 （非官方移植版） | 826。9 kB | 3，716。0 kB | [檔案列表] |
| x32 （非官方移植版） | 782。7 kB | 1，744。0 kB | [檔案列表] |