[ 原始碼： r-bioc-shortread ]
套件：r-bioc-shortread（1.60.0-2 以及其他的）
r-bioc-shortread 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-shortread：
- [r-bioc-shortread_1.60.0-2.dsc]
- [r-bioc-shortread_1.60.0.orig.tar.gz]
- [r-bioc-shortread_1.60.0-2.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
其他與 r-bioc-shortread 有關的套件
|
|
|
|
-
- dep: libc6 (>= 2.14) [amd64]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.16) [x32]
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.27) [riscv64]
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.7) [hppa, m68k, mips64el, ppc64, s390x, sparc64]
-
- dep: libc6.1 (>= 2.37) [ia64]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
- dep: libc6.1 (>= 2.7) [alpha]
-
- dep: libgcc-s1 (>= 3.0) [除 hppa, ia64, m68k, sparc64]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 4.2) [ia64]
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC 支援函式庫
-
- dep: libgcc1 (>= 1:3.0) [sparc64]
- 套件暫時不可用
-
- dep: libgcc2 (>= 4.2.1) [m68k]
- 套件暫時不可用
-
- dep: libgomp1 (>= 4.2.1) [m68k, sparc64]
- GCC OpenMP (GOMP) support library
-
- dep: libstdc++6 (>= 11) [除 m68k, sparc64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 5.2) [m68k, sparc64]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: r-api-3.4 [m68k]
- 套件暫時不可用
-
- dep: r-api-3.5 [sparc64]
- 套件暫時不可用
-
- dep: r-api-4.0 [除 m68k, sparc64]
- 本虛擬套件由這些套件填實： r-base-core
-
- dep: r-api-bioc-3.16 [x32]
- 套件暫時不可用
-
- dep: r-api-bioc-3.18 [除 m68k, sparc64, x32]
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
-
- dep: r-api-bioc-3.8 [sparc64]
- 套件暫時不可用
-
- dep: r-base-core (>= 3.4.3-1) [m68k]
- GNU R core of statistical computation and graphics system
- dep: r-base-core (>= 3.5.2-1) [sparc64]
- dep: r-base-core (>= 4.2.2.20221110-1) [x32]
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.23.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.37.1) [m68k]
- GNU R string objects representing biological sequences
- dep: r-bioc-biostrings (>= 2.47.6) [除 m68k]
-
- dep: r-bioc-genomeinfodb (>= 1.1.19) [m68k]
- BioConductor utilities for manipulating chromosome identifiers
- dep: r-bioc-genomeinfodb (>= 1.15.2) [除 m68k]
-
- dep: r-bioc-genomicalignments (>= 1.15.6) [除 m68k]
- BioConductor representation and manipulation of short genomic alignments
- dep: r-bioc-genomicalignments (>= 1.5.4) [m68k]
-
- dep: r-bioc-genomicranges (>= 1.21.6) [m68k]
- BioConductor representation and manipulation of genomic intervals
- dep: r-bioc-genomicranges (>= 1.31.8) [除 m68k]
-
- dep: r-bioc-iranges (>= 2.13.12) [除 m68k]
- GNU R low-level containers for storing sets of integer ranges
- dep: r-bioc-iranges (>= 2.3.7) [m68k]
-
- dep: r-bioc-rhtslib [除 m68k, sparc64]
- HTSlib high-throughput sequencing library as GNU R package
-
- dep: r-bioc-rsamtools (>= 1.21.4) [m68k]
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
- dep: r-bioc-rsamtools (>= 1.31.2) [除 m68k]
-
- dep: r-bioc-s4vectors (>= 0.13.8) [m68k]
- BioConductor S4 implementation of vectors and lists
- dep: r-bioc-s4vectors (>= 0.17.25) [除 m68k]
-
- dep: r-bioc-xvector [除 m68k, sparc64]
- BioConductor representation and manpulation of external sequences
-
- dep: r-bioc-zlibbioc [除 m68k, sparc64]
- (Virtual) zlibbioc Bioconductor package
-
- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
-
- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
-
- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
-
- dep: zlib1g (>= 1:1.1.4)
- 壓縮函式庫 - 跑程式時用(runtime)
-
- rec: r-cran-runit
- GNU R package providing unit testing framework
-
- sug: r-bioc-biocstyle [除 m68k, sparc64]
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-cran-runit [除 sparc64]
- GNU R package providing unit testing framework
下載 r-bioc-shortread
| 硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
|---|---|---|---|---|
| alpha （非官方移植版） | 1.60.0-2 | 5，065。2 kB | 7，559。0 kB | [檔案列表] |
| amd64 | 1.60.0-2 | 5，068。8 kB | 7，507。0 kB | [檔案列表] |
| arm64 | 1.60.0-2 | 5，063。6 kB | 7，557。0 kB | [檔案列表] |
| hppa （非官方移植版） | 1.60.0-2 | 5，064。8 kB | 7，527。0 kB | [檔案列表] |
| ia64 （非官方移植版） | 1.60.0-2 | 5，072。7 kB | 7，620。0 kB | [檔案列表] |
| m68k （非官方移植版） | 1.36.0-1 | 4，189。1 kB | 6，069。0 kB | [檔案列表] |
| mips64el | 1.60.0-2 | 5，058。1 kB | 7，571。0 kB | [檔案列表] |
| ppc64 （非官方移植版） | 1.60.0-2 | 5，070。7 kB | 7，626。0 kB | [檔案列表] |
| ppc64el | 1.60.0-2 | 5，069。7 kB | 7，621。0 kB | [檔案列表] |
| riscv64 | 1.60.0-2 | 5，066。5 kB | 7，491。0 kB | [檔案列表] |
| s390x | 1.60.0-2 | 5，067。5 kB | 7，521。0 kB | [檔案列表] |
| sh4 （非官方移植版） | 1.60.0-2 | 5，066。6 kB | 7，494。0 kB | [檔案列表] |
| sparc64 （非官方移植版） | 1.40.0-1 | 4，896。8 kB | 7，343。0 kB | [檔案列表] |
| x32 （非官方移植版） | 1.56.1-1 | 5，043。0 kB | 7，479。0 kB | [檔案列表] |