[ 原始碼： libvcflib ]
套件：libvcflib-tools（1.0.9+dfsg1-3 以及其他的）
libvcflib-tools 的相關連結
Debian 的資源：
下載原始碼套件 libvcflib：
- [libvcflib_1.0.9+dfsg1-3.dsc]
- [libvcflib_1.0.9+dfsg1.orig.tar.xz]
- [libvcflib_1.0.9+dfsg1-3.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [github.com]
相似套件：
C++ library for parsing and manipulating VCF files (tools)
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.
vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:
* an API for parsing and operating on records of genomic variation as it can be described by the VCF format, * and a collection of command-line utilities for executing complex manipulations on VCF files.
This package contains several tools using the library.
其他與 libvcflib-tools 有關的套件
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- dep: libbz2-1.0 [sparc64]
- high-quality block-sorting file compressor library - runtime
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- dep: libc6 (>= 2.34) [除 alpha, ia64, sh4]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.35) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
- dep: libc6.1 (>= 2.35) [ia64]
-
- dep: libdisorder0 (>= 0.0.2)
- library for entropy measurement of byte streams
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- dep: libfastahack0 (>= 0.0+git20160702.bbc645f) [amd64, arm64, ia64, mips64el, ppc64el, sparc64]
- library for indexing and sequence extraction from FASTA files (lib)
- dep: libfastahack0 (>= 1.0.0+dfsg) [alpha, m68k, ppc64, riscv64, sh4, x32]
-
- dep: libgcc-s1 (>= 3.0) [x32]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.3.1) [amd64, arm64, mips64el]
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sh4, sparc64]
- dep: libgcc-s1 (>= 3.4.4) [ppc64, ppc64el]
- dep: libgcc-s1 (>= 4.2) [ia64]
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- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC 支援函式庫
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- dep: libgomp1 (>= 4.2.1) [除 ia64, m68k, ppc64, sh4, x32]
- GCC OpenMP (GOMP) support library
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- dep: libhts3 (>= 1.10) [sparc64]
- C library for high-throughput sequencing data formats
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- dep: liblzma5 (>= 5.1.1alpha+20110809) [sparc64]
- XZ-format compression library
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- dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
- determine similar regions between two strings or genomic sequences (lib)
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- dep: libssw0 (>= 1.1) [sparc64]
- fast SIMD parallelized implementation of the Smith-Waterman algorithm
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- dep: libstdc++6 (>= 11) [ia64, m68k, ppc64, sh4, sparc64, x32]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 13.1) [amd64, arm64, mips64el, ppc64el, riscv64]
- dep: libstdc++6 (>= 13.2.0-7) [alpha]
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- dep: libtabixpp0 (>= 1.0.0) [除 amd64, arm64, mips64el, ppc64el, riscv64]
- C++ wrapper to tabix indexer
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- dep: libtabixpp0t64 (>= 1.0.0) [amd64, arm64, mips64el, ppc64el, riscv64]
- C++ wrapper to tabix indexer
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: libvcflib1 (>= 1.0.3+dfsg) [ia64, m68k, ppc64, sh4, sparc64, x32]
- C++ library for parsing and manipulating VCF files
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- dep: libvcflib2 (>= 1.0.9+dfsg1) [alpha, amd64, arm64, mips64el, ppc64el, riscv64]
- C++ library for parsing and manipulating VCF files
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- dep: libwfa2-0 (>= 2.3.3) [alpha, amd64, arm64, mips64el, ppc64el, riscv64]
- exact gap-affine algorithm (shared library)
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- dep: r-cran-plyr
- tools for splitting, applying and combining data
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- dep: zlib1g (>= 1:1.1.4) [sparc64]
- 壓縮函式庫 - 跑程式時用(runtime)
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- sug: r-cran-pracma
- practical numerical math functions for GNU R
下載 libvcflib-tools
| 硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
|---|---|---|---|---|
| alpha （非官方移植版） | 1.0.9+dfsg1-3 | 613。1 kB | 6，870。0 kB | [檔案列表] |
| amd64 | 1.0.9+dfsg1-3+b1 | 635。3 kB | 3，830。0 kB | [檔案列表] |
| arm64 | 1.0.9+dfsg1-3+b1 | 564。4 kB | 6，594。0 kB | [檔案列表] |
| ia64 （非官方移植版） | 1.0.3+dfsg-2 | 853。2 kB | 8，189。0 kB | [檔案列表] |
| m68k （非官方移植版） | 1.0.3+dfsg-2 | 711。2 kB | 4，531。0 kB | [檔案列表] |
| mips64el | 1.0.9+dfsg1-3+b1 | 591。2 kB | 6，858。0 kB | [檔案列表] |
| ppc64 （非官方移植版） | 1.0.3+dfsg-2 | 707。1 kB | 8，228。0 kB | [檔案列表] |
| ppc64el | 1.0.9+dfsg1-3+b1 | 624。2 kB | 6，786。0 kB | [檔案列表] |
| riscv64 | 1.0.9+dfsg1-3+b1 | 619。9 kB | 2，974。0 kB | [檔案列表] |
| sh4 （非官方移植版） | 1.0.3+dfsg-2 | 808。7 kB | 6，691。0 kB | [檔案列表] |
| sparc64 （非官方移植版） | 1.0.3+dfsg-2 | 816。8 kB | 91，827。0 kB | [檔案列表] |
| x32 （非官方移植版） | 1.0.3+dfsg-2 | 729。6 kB | 4，483。0 kB | [檔案列表] |