[ 原始碼： r-bioc-deseq2 ]
套件：r-bioc-deseq2（1.42.1+dfsg-1 以及其他的）
r-bioc-deseq2 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-deseq2：
- [r-bioc-deseq2_1.42.1+dfsg-1.dsc]
- [r-bioc-deseq2_1.42.1+dfsg.orig.tar.xz]
- [r-bioc-deseq2_1.42.1+dfsg-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
R package for RNA-Seq Differential Expression Analysis
Differential gene expression analysis based on the negative binomial distribution. Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.
其他與 r-bioc-deseq2 有關的套件
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虛擬套件由這些套件填實： libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libc6 (>= 2.27) [riscv64]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
- dep: libc6 (>= 2.29) [除 alpha, ia64, riscv64, sh4]
- dep: libc6 (>= 2.37) [sh4]
-
- dep: libc6.1 (>= 2.29) [alpha]
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
-
- dep: libgcc-s1 (>= 3.0) [除 armel, armhf, hppa, ia64, sh4]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.3.4) [sh4]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
-
- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC 支援函式庫
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- dep: libgfortran5 (>= 8) [sparc64]
- Runtime library for GNU Fortran applications
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- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- 或者 liblapack.so.3
- 本虛擬套件由這些套件填實： libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libstdc++6 (>= 13.1) [除 x32]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 9) [x32]
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
-
- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
-
- dep: r-api-bioc-3.16 [x32]
- 套件暫時不可用
-
- dep: r-api-bioc-3.18 [除 x32]
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-base-core (>= 4.2.2.20221110-2) [x32]
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.7.5)
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-geneplotter [x32]
- R package of functions for plotting genomic data
-
- dep: r-bioc-genomicranges
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-matrixgenerics [除 x32]
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
-
- dep: r-bioc-s4vectors (>= 0.23.18)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.1.6)
- BioConductor assay container
-
- dep: r-cran-ggplot2 [x32]
- implementation of the Grammar of Graphics
- dep: r-cran-ggplot2 (>= 3.4.0) [除 x32]
-
- dep: r-cran-locfit
- GNU R local regression, likelihood and density estimation
-
- dep: r-cran-matrixstats
- GNU R methods that apply to rows and columns of a matrix
-
- dep: r-cran-rcpp (>= 0.11.0)
- GNU R package for Seamless R and C++ Integration
-
- dep: r-cran-rcpparmadillo
- GNU R package for Armadillo C++ linear algebra library
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- sug: r-bioc-glmgampoi
- GNU R fit a Gamma-Poisson generalized linear model
-
- sug: r-bioc-tximeta
- Transcript Quantification Import with Automatic Metadata
-
- sug: r-bioc-tximport
- transcript-level estimates for biological sequencing
-
- sug: r-bioc-tximportdata
- GNU R various transcript abundance quantifiers
-
- sug: r-cran-biocmanager
- access the Bioconductor project package repository
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-pbapply
- GNU R package providing progress bars for vectorized R functions
-
- sug: r-cran-pheatmap
- GNU R package to create pretty heatmaps
-
- sug: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
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- sug: r-cran-readr
- GNU R package to read rectangular text data
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-testthat
- GNU R testsuite
下載 r-bioc-deseq2
| 硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
|---|---|---|---|---|
| alpha （非官方移植版） | 1.42.1+dfsg-1 | 1，231。0 kB | 1，740。0 kB | [檔案列表] |
| amd64 | 1.42.1+dfsg-1 | 1，237。3 kB | 1，716。0 kB | [檔案列表] |
| arm64 | 1.42.1+dfsg-1 | 1，224。5 kB | 1，740。0 kB | [檔案列表] |
| armel | 1.42.1+dfsg-1 | 1，229。9 kB | 1，706。0 kB | [檔案列表] |
| armhf | 1.42.1+dfsg-1 | 1，227。8 kB | 1，642。0 kB | [檔案列表] |
| hppa （非官方移植版） | 1.42.1+dfsg-1 | 1，234。4 kB | 1，718。0 kB | [檔案列表] |
| i386 | 1.42.1+dfsg-1 | 1，246。1 kB | 1，742。0 kB | [檔案列表] |
| ia64 （非官方移植版） | 1.42.1+dfsg-1 | 1，254。7 kB | 1，916。0 kB | [檔案列表] |
| mips64el | 1.42.1+dfsg-1 | 1，226。9 kB | 1，748。0 kB | [檔案列表] |
| ppc64 （非官方移植版） | 1.42.1+dfsg-1 | 1，237。9 kB | 1，808。0 kB | [檔案列表] |
| ppc64el | 1.42.1+dfsg-1 | 1，237。7 kB | 1，804。0 kB | [檔案列表] |
| riscv64 | 1.42.1+dfsg-1 | 1，238。0 kB | 1，679。0 kB | [檔案列表] |
| s390x | 1.42.1+dfsg-1 | 1，240。6 kB | 1，731。0 kB | [檔案列表] |
| sh4 （非官方移植版） | 1.42.1+dfsg-1 | 1，256。3 kB | 1，738。0 kB | [檔案列表] |
| sparc64 （非官方移植版） | 1.42.1+dfsg-1 | 1，222。1 kB | 2，514。0 kB | [檔案列表] |
| x32 （非官方移植版） | 1.38.3+dfsg-1 | 1，258。9 kB | 1，736。0 kB | [檔案列表] |