[ 源代码： megadepth ]
软件包：megadepth（1.2.0-4 以及其他的）
computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is the number of reads that cover a particular area. This package has interesting statistics for the distinction of coding and non-coding parts of the genome and knows how to interpret transcripts that span multiple exons.
This package is a successor of the program 'bamcount'.
其他与 megadepth 有关的软件包
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- dep: libbigwig0t64 (>= 0.4.6)
- C library for handling bigWig files
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- dep: libc6 (>= 2.34) [除 alpha, ia64, sh4]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
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- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6.1-udeb
- dep: libc6.1 (>= 2.37) [ia64]
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- dep: libcurl3t64-gnutls (>= 7.16.2) [sparc64]
- easy-to-use client-side URL transfer library (GnuTLS flavour)
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- dep: libdeflate0 (>= 1.0) [sparc64]
- fast, whole-buffer DEFLATE-based compression and decompression
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- dep: libgcc-s1 (>= 3.0) [amd64, arm64, mips64el, ppc64, ppc64el, s390x, x32]
- GCC 支持库
- dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [i386, ia64, sh4]
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC 支持库
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- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 13.1)
- GNU 标准 C++ 库，第3版
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- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: zlib1g (>= 1:1.1.4) [sparc64]
- 压缩库 - 运行时
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- sug: r-bioc-megadepth
- BioCOnductor BigWig and BAM related utilities
下载 megadepth
| 硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
|---|---|---|---|---|
| alpha （非官方移植版） | 1.2.0-4+b1 | 78.4 kB | 276.0 kB | [文件列表] |
| amd64 | 1.2.0-4+b1 | 81.0 kB | 275.0 kB | [文件列表] |
| arm64 | 1.2.0-4+b1 | 71.0 kB | 275.0 kB | [文件列表] |
| armel | 1.2.0-4+b1 | 70.9 kB | 234.0 kB | [文件列表] |
| armhf | 1.2.0-4+b1 | 72.5 kB | 178.0 kB | [文件列表] |
| hppa （非官方移植版） | 1.2.0-4+b1 | 80.2 kB | 252.0 kB | [文件列表] |
| i386 | 1.2.0-4+b1 | 84.1 kB | 274.0 kB | [文件列表] |
| ia64 （非官方移植版） | 1.2.0-4+b1 | 99.7 kB | 467.0 kB | [文件列表] |
| mips64el | 1.2.0-4+b1 | 71.9 kB | 282.0 kB | [文件列表] |
| ppc64 （非官方移植版） | 1.2.0-4+b1 | 81.5 kB | 339.0 kB | [文件列表] |
| ppc64el | 1.2.0-4+b1 | 83.3 kB | 339.0 kB | [文件列表] |
| riscv64 | 1.2.0-4+b2 | 79.8 kB | 219.0 kB | [文件列表] |
| s390x | 1.2.0-4+b1 | 82.1 kB | 271.0 kB | [文件列表] |
| sh4 （非官方移植版） | 1.2.0-4+b1 | 91.8 kB | 275.0 kB | [文件列表] |
| sparc64 （非官方移植版） | 1.2.0-4+b1 | 70.2 kB | 1,047.0 kB | [文件列表] |
| x32 （非官方移植版） | 1.2.0-4+b1 | 83.8 kB | 258.0 kB | [文件列表] |