软件包：libtfbs-perl（0.7.1-3 以及其他的）

libtfbs-perl 的相关链接

Debian 的资源：

下载源码包 libtfbs-perl：

维护小组：

外部的资源：

主页 [tfbs.genereg.net]

相似软件包：

scanning DNA sequence with a position weight matrix

The TFBS perl modules comprise a set of routines to interact with the Transfac and Jaspar databases that describe a special family of proteins, the transcription factors. These bind to genomic DNA to initiate (or prevent) the readout of a gene. Once multiple binding sites are known for a transcription factor, these are gathered in a single file and are aligned in order to find position-specific characteristica that might be used to predict such binding events in novel DNA sequences.

If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002) TFBS: Computational framework for transcription factor binding site analysis. Bioinformatics 18:1135-1136".

Note: the TFBS perl module is no longer under active development. All the functionality can be found in the TFBSTools Bioconductor package; users are highly encouraged to switch. <http://bioconductor.org/packages/TFBSTools/>

标签: 软件开发: Perl 开发, 函数库, 领域: field::biology, field::biology:bioinformatics, 实做语言: C, implemented-in::perl, interface::commandline, 角色: 开发用函数库, 程序

其他与 libtfbs-perl 有关的软件包

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建议

增强

dep: bioperl

用于处理计算分子生物学的 Perl 工具
dep: libc6 (>= 2.14) [amd64]

GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb

dep: libc6 (>= 2.17) [arm64, ppc64el]

dep: libc6 (>= 2.7) [除 amd64, arm64, ppc64el]
dep: libdbi-perl

Perl Database Interface (DBI)
dep: libwww-perl

simple and consistent interface to the world-wide web
dep: pdl (>= 1:2.021-2+b1)

perl data language: Perl extensions for numerics
dep: pdlapi-12

本虚包由这些包填实： pdl
dep: perl (>= 5.32.0-4)

拉里沃尔的实用报表提取语言(Perl)
dep: perlapi-5.32.0

本虚包由这些包填实： perl-base

rec: libgd-gd2-perl

本虚包由这些包填实： libgd-perl

或者 libgd-gd2-noxpm-perl

本虚包由这些包填实： libgd-perl

下载 libtfbs-perl

下载可用于所有硬件架构的
硬件架构	版本	软件包大小	安装后大小	文件
amd64	0.7.1-3+b2	228.4 kB	989.0 kB	[文件列表]
arm64	0.7.1-3+b2	228.4 kB	989.0 kB	[文件列表]
armel	0.7.1-3+b2	229.5 kB	989.0 kB	[文件列表]
armhf	0.7.1-3+b2	227.8 kB	985.0 kB	[文件列表]
i386	0.7.1-3+b2	229.1 kB	993.0 kB	[文件列表]
mips64el	0.7.1-3+b2	228.4 kB	990.0 kB	[文件列表]
mipsel	0.7.1-3+b2	228.1 kB	986.0 kB	[文件列表]
ppc64el	0.7.1-3+b2	229.3 kB	1,037.0 kB	[文件列表]
s390x	0.7.1-3+b2	228.3 kB	989.0 kB	[文件列表]