[ 源代码： centrifuge ]
软件包：centrifuge（1.0.3-8）
rapid and memory-efficient system for classification of DNA sequences
Centrifuge is a very rapid and memory-efficient system for the classification of DNA sequences from microbial samples, with better sensitivity than and comparable accuracy to other leading systems. The system uses a novel indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index, optimized specifically for the metagenomic classification problem. Centrifuge requires a relatively small index (e.g., 4.3 GB for ~4,100 bacterial genomes) yet provides very fast classification speed, allowing it to process a typical DNA sequencing run within an hour. Together these advances enable timely and accurate analysis of large metagenomics data sets on conventional desktop computers.
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同时作为一个虚包由这些包填实： libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [除 armel, armhf, i386]
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- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libstdc++6 (>= 9)
- GNU 标准 C++ 库，第3版
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- 交互式高级面向对象语言（默认 python3 版本）