Paket: libvcflib-tools (1.0.9+dfsg1-3 ve diğerleri)

libvcflib-tools için bağlantılar

Debian Kaynakları:

libvcflib Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Ana Sayfa [github.com]

Benzer paketler:

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

libvcflib-tools ile İlgili Diğer Paketler

bağımlılıklar

tavsiye edilen

önerilen

enhances

dep: libc6 (>= 2.38)

GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f)

library for indexing and sequence extraction from FASTA files (lib)
dep: libgcc-s1 (>= 3.3.1)

GCC support library
dep: libgomp1 (>= 4.2.1)

GCC OpenMP (GOMP) support library
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 13.1)

GNU Standard C++ Library v3
dep: libtabixpp0t64 (>= 1.0.0)

C++ wrapper to tabix indexer
dep: libvcflib2 (>= 1.0.9+dfsg1)

C++ library for parsing and manipulating VCF files
dep: libwfa2-0 (>= 2.3.3)

exact gap-affine algorithm (shared library)
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: r-base-core

GNU R core of statistical computation and graphics system
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-gridbase

GNU R Integration of base and grid graphics
dep: r-cran-plyr

tools for splitting, applying and combining data

sug: r-cran-pracma

practical numerical math functions for GNU R

libvcflib-tools indir

Tüm mevcut mimariler için indir
Mimari	Sürüm	Paket Boyutu	Kurulu Boyut	Dosyalar
arm64	1.0.9+dfsg1-3+b2	576,5 kB	6.594,0 kB	[dosya listesi]