tüm seçenekler
buster  ] [  bullseye  ] [  bookworm  ] [  trixie  ] [  sid  ]
[ Kaynak: clonalframeml  ]

Paket: clonalframeml (1.13-1)

clonalframeml için bağlantılar

Screenshot

Debian Kaynakları:

clonalframeml Kaynak Paketini İndir:

Geliştiriciler:

Dış Kaynaklar:

Benzer paketler:

Efficient Inference of Recombination in Whole Bacterial Genomes

ClonalFrameML is a software package that performs efficient inference of recombination in bacterial genomes. ClonalFrameML was created by Xavier Didelot and Daniel Wilson. ClonalFrameML can be applied to any type of aligned sequence data, but is especially aimed at analysis of whole genome sequences. It is able to compare hundreds of whole genomes in a matter of hours on a standard Desktop computer. There are three main outputs from a run of ClonalFrameML: a phylogeny with branch lengths corrected to account for recombination, an estimation of the key parameters of the recombination process, and a genomic map of where recombination took place for each branch of the phylogeny.

ClonalFrameML is a maximum likelihood implementation of the Bayesian software ClonalFrame which was previously described by Didelot and Falush (2007). The recombination model underpinning ClonalFrameML is exactly the same as for ClonalFrame, but this new implementation is a lot faster, is able to deal with much larger genomic dataset, and does not suffer from MCMC convergence issues

clonalframeml ile İlgili Diğer Paketler

  • bağımlılıklar
  • tavsiye edilen
  • önerilen
  • enhances

clonalframeml indir

Tüm mevcut mimariler için indir
Mimari Paket Boyutu Kurulu Boyut Dosyalar
amd64 103,9 kB283,0 kB [dosya listesi]