Paket: seer (1.1.4-7 ve diğerleri)
seer için bağlantılar
Debian Kaynakları:
- Hata Raporları
- Developer Information
- Debian Değişim Günlüğü
- Telif Hakkı Dosyası
- Debian Yama Takipçisi
seer Kaynak Paketini İndir:
Geliştiriciler:
- Debian Med Packaging Team (QA Sayfası, Posta Arşivi)
- Andreas Tille (QA Sayfası)
- Étienne Mollier (QA Sayfası)
Dış Kaynaklar:
- Ana Sayfa [github.com]
Benzer paketler:
genomic sequence element (kmer) enrichment analysis
Bacterial genomes vary extensively in terms of both gene content and gene sequence - this plasticity hampers the use of traditional SNP-based methods for identifying all genetic associations with phenotypic variation. SEER provides a computationally scalable and widely applicable statistical method for the identification of sequence elements that are significantly enriched in a phenotype of interest. SEER is applicable to even tens of thousands of genomes by counting variable- length k-mers using a distributed string-mining algorithm. Robust options are provided for association analysis that also correct for the clonal population structure of bacteria. Using large collections of genomes of the major human pathogen Streptococcus pneumoniae, SEER identifies relevant previously characterised resistance determinants for several antibiotics.
seer ile İlgili Diğer Paketler
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- dep: libarmadillo10 (>= 1:10.6.2+dfsg) [ia64]
- Paket mevcut değil
-
- dep: libarmadillo12 (>= 1:12.6.7+dfsg) [hppa, ia64 değil]
- streamlined C++ linear algebra library
- dep: libarmadillo12 (>= 1:12.8.2+dfsg) [hppa]
-
- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- ya da libblas.so.3
- sanal paketi sağlayan libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libboost-program-options1.74.0 (>= 1.74.0) [ia64]
- program options library for C++
- dep: libboost-program-options1.74.0 (>= 1.74.0+ds1) [x32]
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- dep: libboost-program-options1.83.0 (>= 1.83.0) [ia64, x32 değil]
- program options library for C++
-
- dep: libc6 (>= 2.34) [alpha, hppa, ia64, sh4 değil]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6-udeb
- dep: libc6 (>= 2.37) [sh4]
- dep: libc6 (>= 2.38) [hppa]
-
- dep: libc6.1 (>= 2.32) [ia64]
- GNU C Library: Shared libraries
ayrıca şunun tarafından sağlanan bir sanal paket libc6.1-udeb
- dep: libc6.1 (>= 2.34) [alpha]
-
- dep: libgcc-s1 (>= 3.0) [amd64, ppc64, ppc64el, s390x, x32]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [alpha, sparc64]
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
- dep: libgcc-s1 (>= 4.2) [ia64, sh4]
- dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]
- dep: libgcc-s1 (>= 7) [i386]
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- dep: libgcc-s2 (>= 4.2.1) [m68k]
- GCC support library
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- dep: libgcc-s4 (>= 4.1.1) [hppa]
- GCC support library
-
- dep: libgzstream0 (>= 1.5+dfsg)
- provide functionality of zlib C-library in a C++ iostream
-
- dep: libhdf5-103-1 [ia64]
- HDF5 C runtime files - serial version
-
- dep: libhdf5-103-1t64 [ia64 değil]
- HDF5 C runtime files - serial version
-
- dep: liblapack3 [sparc64]
- Library of linear algebra routines 3 - shared version
- ya da liblapack.so.3
- sanal paketi sağlayan libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
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- dep: libstdc++6 (>= 11) [ia64]
- GNU Standard C++ Library v3
- dep: libstdc++6 (>= 13.1) [alpha, ia64 değil]
- dep: libstdc++6 (>= 14-20240221-2.1) [alpha]
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- dep: libtext-csv-perl
- comma-separated values manipulator (using XS or PurePerl)
-
- dep: libunwind8 [ia64]
- library to determine the call-chain of a program - runtime
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- sug: fsm-lite
- frequency-based string mining (lite)
seer indir
Mimari | Sürüm | Paket Boyutu | Kurulu Boyut | Dosyalar |
---|---|---|---|---|
alpha (resmi olmayan port) | 1.1.4-7+b4 | 1.140,8 kB | 5.103,0 kB | [dosya listesi] |
amd64 | 1.1.4-7+b3 | 1.169,0 kB | 4.924,0 kB | [dosya listesi] |
arm64 | 1.1.4-7+b3 | 1.115,2 kB | 4.900,0 kB | [dosya listesi] |
armel | 1.1.4-7+b3 | 1.105,4 kB | 4.743,0 kB | [dosya listesi] |
armhf | 1.1.4-7+b3 | 1.095,2 kB | 4.239,0 kB | [dosya listesi] |
hppa (resmi olmayan port) | 1.1.4-7+b3 | 1.121,8 kB | 4.699,0 kB | [dosya listesi] |
i386 | 1.1.4-7+b3 | 1.173,3 kB | 4.903,0 kB | [dosya listesi] |
ia64 (resmi olmayan port) | 1.1.4-6 | 1.218,9 kB | 6.648,0 kB | [dosya listesi] |
m68k (resmi olmayan port) | 1.1.4-7+b3 | 1.132,9 kB | 4.807,0 kB | [dosya listesi] |
mips64el | 1.1.4-7+b3 | 1.134,6 kB | 5.372,0 kB | [dosya listesi] |
ppc64 (resmi olmayan port) | 1.1.4-7+b3 | 1.138,3 kB | 5.412,0 kB | [dosya listesi] |
ppc64el | 1.1.4-7+b3 | 1.149,2 kB | 5.284,0 kB | [dosya listesi] |
riscv64 | 1.1.4-7+b4 | 1.149,9 kB | 4.440,0 kB | [dosya listesi] |
s390x | 1.1.4-7+b3 | 1.160,7 kB | 4.972,0 kB | [dosya listesi] |
sh4 (resmi olmayan port) | 1.1.4-7+b3 | 1.198,9 kB | 4.900,0 kB | [dosya listesi] |
sparc64 (resmi olmayan port) | 1.1.4-7+b3 | 1.114,4 kB | 8.318,0 kB | [dosya listesi] |
x32 (resmi olmayan port) | 1.1.4-7+b3 | 1.164,5 kB | 4.771,0 kB | [dosya listesi] |